RNA–Protein interactions for RNA: ENST00000557638.1

RALGAPA1-218, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 2

Gene RALGAPA1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-218	ENST00000557638	TCHH	Q07283	1943 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	DUOX1	Q9NRD9	1551 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	SNED1	Q8TER0	1413 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FAM90A18P	A6NE21	464 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FAM90A16P	A6NEW6	464 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	AQP12B	A6NM10	295 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FAM90A9P	A6NNJ1	464 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FAM90A5P	A8MXJ8	464 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	MCIDAS	D6RGH6	385 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FRAT2	O75474	233 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	TBX18	O95935	607 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	LCK	P06239	509 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	UQCRFS1P1	P0C7P4	283 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FAM90A15P	P0C7V4	464 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FAM90A14P	P0C7W9	464 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	HSPD1	P10809	573 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	CKMT1A	P12532	417 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	ELF1	P32519	619 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	UBA7	P41226	1012 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	CDK7	P50613	346 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	EVC	P57679	992 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	GAD2	Q05329	585 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	CHRND	Q07001	517 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	ALX1	Q15699	326 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	STOX1	Q6ZVD7	989 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	STYX	Q8WUJ0	223 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	SECISBP2L	Q93073	1101 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	EID2B	Q96D98	161 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	THOC3	Q96J01	351 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	ADAD1	Q96M93	576 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	MAGEH1	Q9H213	219 aa		4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	PIH1D3	Q9NQM4	214 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	CDH23	Q9H251	3354 aa		4.9	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	FER1L6	Q2WGJ9	1857 aa		4.9	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	CDK5RAP2	Q96SN8	1893 aa		4.9	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	DICER1	Q9UPY3	1922 aa	Known RBP	4.9	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	DDX60L	Q5H9U9	1706 aa	Known RBP	4.9	□□□□□ -1.62
RALGAPA1-218	ENST00000557638	TBC1D3D	A0A087WVF3	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3I	A0A087WXS9	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3E	A0A087X179	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3K	A0A087X1G2	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3B	A6NDS4	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CXorf65	A6NEN9	183 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	GAGE12J	A6NER3	117 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3L	B9A6J9	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638		H0YGN5	161 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	SNAP23	O00161	211 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	FFAR2	O15552	330 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	DDN	O94850	711 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	KLKB1	P03952	638 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	POLB	P06746	335 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CYP21A2	P08686	494 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3H	P0C7X1	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	HMGB2	P26583	209 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CDC25A	P30304	524 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	LIFR	P42702	1097 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TUB	P50607	506 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	RASSF2	P50749	326 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	DCAF7	P61962	342 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CCDC158	Q5M9N0	1113 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3G	Q6DHY5	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3C	Q6IPX1	549 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	PRR5L	Q6MZQ0	368 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	HMBOX1	Q6NT76	420 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	PGBD2	Q6P3X8	592 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	PARM1	Q6UWI2	310 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CCDC129	Q6ZRS4	1044 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	GPSM1	Q86YR5	675 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CHCHD4	Q8N4Q1	142 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	ESX1	Q8N693	406 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	OR1N1	Q8NGS0	311 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	CLEC4C	Q8WTT0	213 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	FAM84B	Q96KN1	310 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	RMDN3	Q96TC7	470 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	NPAS1	Q99742	590 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	UPF3B	Q9BZI7	483 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	LMAN2L	Q9H0V9	348 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	RBM38	Q9H0Z9	239 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	GIMAP2	Q9UG22	337 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	DTX4	Q9Y2E6	619 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	WDR19	Q8NEZ3	1342 aa		4.9	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	COL4A5	P29400	1685 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TTC28	Q96AY4	2481 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	FOCAD	Q5VW36	1801 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	FAM170A	A1A519	330 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638		A6NLC8	198 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	TNFRSF13B	O14836	293 aa	Predicted RBP	4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	MSI1	O43347	362 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	FAM200B	P0CF97	657 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	T-ENOL	P0DO92	83 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	ATP1A3	P13637	1013 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	OAS2	P29728	719 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	STAT1	P42224	750 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	RFX2	P48378	723 aa		4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	RPS8	P62241	208 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-218	ENST00000557638	PMPCA	Q10713	525 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms