RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CCDC91Q7Z6B0 441 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CMC1Q7Z7K0 106 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 TTC30BQ8N4P2 665 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ARMC2Q8NEN0 867 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 OR4K2Q8NGD2 314 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 OR6K2Q8NGY2 324 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 TSPAN17Q96FV3 270 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ZNF641Q96N77 438 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 TCF12Q99081 682 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ZFP14Q9HCL3 533 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CATSPERZQ9NTU4 200 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 FGFR1OP2Q9NVK5 253 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 LMCD1Q9NZU5 365 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ZNF711Q9Y462 761 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 A0A087X1B8 175 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 A0A0J9YYE9 177 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 KLF11O14901 512 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 AURKAO14965 403 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PFDN6O15212 129 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 LINC01565O15544 149 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 BUD23O43709 281 aaKnown RBP12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PLIN3O60664 434 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 HAUS5O94927 633 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PIGNO95427 931 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 S1PR4O95977 384 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 TRBC1P01850 177 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 APOA4P06727 396 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 ABCG1P45844 678 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 CCNHP51946 323 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-233ENST00000557529 RAB10P61026 200 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 TYSND1Q2T9J0 566 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 FASTKD1Q53R41 847 aaKnown RBP12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PPM1JQ5JR12 505 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 TRIM68Q6AZZ1 485 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PIGWQ7Z7B1 504 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 CLEC14AQ86T13 490 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 SLC41A1Q8IVJ1 513 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 ETFBKMTQ8IXQ9 262 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 ELMO2Q96JJ3 720 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 FAM83CQ9BQN1 747 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 GPR63Q9BZJ6 419 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 SUV39H2Q9H5I1 410 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 SUDS3Q9H7L9 328 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-233ENST00000557529 MANSC1Q9H8J5 431 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 CAB39LQ9H9S4 337 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-233ENST00000557529 INTS10Q9NVR2 710 aaKnown RBP12.5□□□□□ -0.41
SHMT2-233ENST00000557529 SLCO3A1Q9UIG8 710 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 ACOT9Q9Y305 439 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PKP3Q9Y446 797 aa12.5□□□□□ -0.41
SHMT2-233ENST00000557529 PDE4DIPQ5VU43 2346 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 WDR91A4D1P6 747 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 OR51F1A6NGY5 319 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CAPN8A6NHC0 703 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 WASH3PC4AMC7 463 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 H7C0S8 307 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CCL22O00626 93 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 TULP3O75386 442 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 PROCP04070 461 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 BPGMP07738 259 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 DLDP09622 509 aaKnown RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ARSAP15289 507 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 SAT1P21673 171 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 FCARP24071 287 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 PMLP29590 882 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 HMGCLP35914 325 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 KPNA2P52292 529 aaKnown RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 PTPRCAPQ14761 206 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ZKSCAN8Q15776 578 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 GEN1Q17RS7 908 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 AARS2Q5JTZ9 985 aaKnown RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 GRAMD4Q6IC98 578 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CNSTQ6PJW8 725 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 DPY19L3Q6ZPD9 716 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 NUDCD3Q8IVD9 361 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ANKS4BQ8N8V4 417 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 GPATCH11Q8N954 259 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CCDC197Q8NCU1 140 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ECHDC3Q96DC8 303 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ASIC4Q96FT7 647 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 SEC16BQ96JE7 1060 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms