RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SEC14L1Q92503 715 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 FUBP1Q96AE4 644 aaKnown RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 FAM149B1Q96BN6 582 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 C14orf79Q96F83 325 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 SMAD5Q99717 465 aaKnown RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 MIS12Q9H081 205 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 MCCC2Q9HCC0 563 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 HECAQ9UBI9 543 aaPredicted RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 ACTL7AQ9Y615 435 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 C19orf84I3L1E1 186 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 CACNB4O00305 520 aaPredicted RBP9.42□□□□□ -0.9
NEDD1-211ENST00000557454 CCNYL3P0C7X3 344 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 CD19P15391 556 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 AK4P27144 223 aaPredicted RBP9.42□□□□□ -0.9
NEDD1-211ENST00000557454 STAT6P42226 847 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 SERPINH1P50454 418 aaKnown RBP9.42□□□□□ -0.9
NEDD1-211ENST00000557454 NEK4P51957 841 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 KIAA1024LP59773 190 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 PPP2R2AP63151 447 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
NEDD1-211ENST00000557454 SLC30A9Q6PML9 568 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 MRGPRGQ86SM5 289 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 TTC7BQ86TV6 843 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 RASGRP3Q8IV61 690 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 OR10G6Q8NH81 332 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 VOPP1Q96AW1 172 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 KLHL32Q96NJ5 620 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 CEP44Q9C0F1 390 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 BRD8Q9H0E9 1235 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 LHX9Q9NQ69 397 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 DLL4Q9NR61 685 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 PADI1Q9ULC6 663 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 ADGRG1Q9Y653 693 aa9.42□□□□□ -0.9
NEDD1-211ENST00000557454 MYO7BQ6PIF6 2116 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 CHD5Q8TDI0 1954 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 SSU72P8A0A1W2PR75 194 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 PRSS38A1L453 326 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 O00370 1275 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 KRIT1O00522 736 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 TRUB2O95900 331 aaKnown RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 IGLV3-25P01717 112 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 PTPN4P29074 926 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 GCLMP48507 274 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 EMP3P54852 163 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 CDH4P55283 916 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 ANAPC15P60006 121 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 ILF3Q12906 894 aaKnown RBP eCLIP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 FOXD4Q12950 439 aaPredicted RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 MTM1Q13496 603 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 RAPGEF1Q13905 1077 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 ANO6Q4KMQ2 910 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 ALFQ53S48 1182 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 VWA5B1Q5TIE3 1220 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 DUS1LQ6P1R4 473 aaKnown RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 WDR74Q6RFH5 385 aaPredicted RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 SYVN1Q86TM6 617 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 CUZD1Q86UP6 607 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 ZNF808Q8N4W9 903 aaPredicted RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 OR7D4Q8NG98 312 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 NCSTNQ92542 709 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 CCDC120Q96HB5 630 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 GSDMCQ9BYG8 508 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 PANK2Q9BZ23 570 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 CARS2Q9HA77 564 aaKnown RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 RPH3AQ9Y2J0 694 aaPredicted RBP9.41□□□□□ -0.9
NEDD1-211ENST00000557454 PLEKHM1Q9Y4G2 1056 aa9.41□□□□□ -0.9
NEDD1-211ENST00000557454 ZGRF1Q86YA3 2104 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 SYNJ2BP-COX16A0A087WUM0 186 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 TNFRSF10CO14798 259 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 IKBKBO14920 756 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 TMEM63AO94886 807 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 FBXO21O94952 628 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 BMP15O95972 392 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 EDN3P14138 238 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 TXLNAP40222 546 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 NDST2P52849 883 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 SH3BP2P78314 561 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 LAMB3Q13751 1172 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 ZNF235Q14590 738 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 LYPLAL1Q5VWZ2 237 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 HGSNATQ68CP4 663 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 FAM199XQ6PEV8 388 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-211ENST00000557454 CCDC73Q6ZRK6 1079 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 CEP97Q8IW35 865 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 TTC39CQ8N584 583 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 LRRN4CLQ8ND94 238 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 CHDHQ8NE62 594 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-211ENST00000557454 SLC35F5Q8WV83 523 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 RELTQ969Z4 430 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 OR6C1Q96RD1 312 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 SLC38A3Q99624 504 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 LGR4Q9BXB1 951 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 MMRN2Q9H8L6 949 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms