RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 NUDT1P36639 197 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 GRIA4P48058 902 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 AFF3P51826 1226 aaKnown RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 CLDN2P57739 230 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 RPL26P61254 145 aaKnown RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 RACK1P63244 317 aaKnown RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 MPP3Q13368 585 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 OLIG2Q13516 323 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 PAPD7Q5XG87 772 aaKnown RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 SLC23A3Q6PIS1 610 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 RABEPKQ7Z6M1 372 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 KIAA2013Q8IYS2 634 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 NDUFAF2Q8N183 169 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 C12orf50Q8NA57 414 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 GLIS1Q8NBF1 620 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 TMEM145Q8NBT3 493 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 ACTRT1Q8TDG2 376 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 RTP4Q96DX8 246 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 NUSAP1Q9BXS6 441 aaKnown RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 ADGRE3Q9BY15 652 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 CAPN10Q9HC96 672 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 RXFP3Q9NSD7 469 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 SLC6A14Q9UN76 642 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 RPL26L1Q9UNX3 145 aaKnown RBP17.54■□□□□ 0.4
SHMT2-225ENST00000556798 PPIL1Q9Y3C6 166 aa17.54■□□□□ 0.4
SHMT2-225ENST00000556798 LNP1A1A4G5 178 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 PRR5-ARHGAP8B1AHC4 643 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 ANKRD66B4E2M5 251 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 METTL18O95568 372 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 NDST3O95803 873 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 GM2AP17900 193 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 CD38P28907 300 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 AKT2P31751 481 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 CHRNA4P43681 627 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 GEMP55040 296 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 ARHGEF7Q14155 803 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 PRPSAP1Q14558 356 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 STAT4Q14765 748 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 ACOX1Q15067 660 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 P3H1Q32P28 736 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 LRRC66Q68CR7 880 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 TTC27Q6P3X3 843 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 DRICH1Q6PGQ1 229 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-225ENST00000556798 CRTC1Q6UUV9 634 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 SYT10Q6XYQ8 523 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 GCNT7Q6ZNI0 430 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 ZSCAN30Q86W11 494 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 SLC25A41Q8N5S1 370 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 C16orf45Q96MC5 204 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-225ENST00000556798 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-225ENST00000556798 KLF6Q99612 283 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-225ENST00000556798 FICDQ9BVA6 458 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 FSD1LQ9BXM9 530 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 SAR1BQ9Y6B6 198 aa17.53■□□□□ 0.4
SHMT2-225ENST00000556798 A0A1W2PR77 199 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 ANXA9O76027 345 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 RECQL5O94762 991 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 SLC4A1P02730 911 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 ATXN1LP0C7T5 689 aaKnown RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 ZSCAN5DPP0CG00 497 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 ENGP17813 658 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 STIP1P31948 543 aaKnown RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 IGFALSP35858 605 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 ETF1P62495 437 aaKnown RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 BNC1Q01954 994 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 GRIK2Q13002 908 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 SPARCL1Q14515 664 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 IRF4Q15306 451 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 TEAD4Q15561 434 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 AASDHQ4L235 1098 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 HS1BP3Q53T59 392 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 SIRPB2Q5JXA9 342 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 HSD11B1LQ7Z5J1 315 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 CCDC89Q8N998 374 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 TP53I13Q8NBR0 393 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 OR2I1PQ8NGU4 316 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 APOL2Q9BQE5 337 aa17.52■□□□□ 0.4
SHMT2-225ENST00000556798 GTPBP2Q9BX10 602 aaKnown RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 MBNL1Q9NR56 388 aaKnown RBP17.52■□□□□ 0.4
SHMT2-225ENST00000556798 C1orf232A0A0U1RR37 186 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 LOC285095A0A1B0GVY8 99 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 POM121BA6NF01 834 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 GDF9O60383 454 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 USP12O75317 370 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 CLDN7O95471 211 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 AGTP01019 485 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 C1SP09871 688 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 CASQ1P31415 396 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 ETV3P41162 512 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-225ENST00000556798 PARP6Q2NL67 630 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 KIF19Q2TAC6 998 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 WSCD2Q2TBF2 565 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 CCDC70Q6NSX1 233 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 RFLNAQ6ZTI6 216 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 NYAP1Q6ZVC0 841 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 GSTA5Q7RTV2 222 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 PTAR1Q7Z6K3 402 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-225ENST00000556798 DENND6BQ8NEG7 585 aa17.51■□□□□ 0.39
SHMT2-225ENST00000556798 ASB12Q8WXK4 309 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms