RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PEBP4Q96S96 227 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 KLF6Q99612 283 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 MAK16Q9BXY0 300 aaKnown RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PDFQ9HBH1 243 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PCDH12Q9NPG4 1184 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 LHX3Q9UBR4 397 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ATP8A1Q9Y2Q0 1164 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 USP24Q9UPU5 2620 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PCDH15Q96QU1 1955 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 MUC22E2RYF6 1773 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 SSU72P8A0A1W2PR75 194 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 FAM149AA5PLN7 773 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 TRABD2BA6NFA1 517 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 PDE2AO00408 941 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 RAD51BO15315 384 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 INSIG1O15503 277 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 AQP9O43315 295 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 KRT37O76014 449 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ELFN1P0C7U0 828 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 CKMT1AP12532 417 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 MX2P20592 715 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 AMPD1P23109 780 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 CES1P23141 567 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 KELP23276 732 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 IL1R2P27930 398 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ACADVLP49748 655 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 PFN3P60673 137 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ITKQ08881 620 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 FGL2Q14314 439 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 FZD2Q14332 565 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 PDK2Q15119 407 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ELOCQ15369 112 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 PRRT3Q5FWE3 981 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 RALGPS1Q5JS13 557 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 AFMIDQ63HM1 303 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 TIGD7Q6NT04 549 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ESRP1Q6NXG1 681 aaKnown RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ZCCHC8Q6NZY4 707 aaKnown RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 PROSER1Q86XN7 944 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 CNGA4Q8IV77 575 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 SDR16C5Q8N3Y7 309 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 FAM181AQ8N9Y4 354 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 LMX1AQ8TE12 382 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 BTBD6Q96KE9 485 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF830Q96NB3 372 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 PIF1Q9H611 641 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 UCKL1Q9NWZ5 548 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 APOBEC3BQ9UH17 382 aaKnown RBP7.37□□□□□ -1.23
SCFD1-222ENST00000556768 GGT7Q9UJ14 662 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 CLCA2Q9UQC9 943 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 NBEAQ8NFP9 2946 aa7.37□□□□□ -1.23
SCFD1-222ENST00000556768 SRRM3A6NNA2 597 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 K7ESM1 405 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CACNB4O00305 520 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TRIM38O00635 465 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TPP1O14773 563 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 BUB1BO60566 1050 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 SOCS5O75159 536 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 PROSCO94903 275 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 GP1BAP07359 652 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ANXA6P08133 673 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ALPIP09923 528 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 C6P13671 934 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CA4P22748 312 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 MMP13P45452 471 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 SLC10A7Q0GE19 358 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TARDBPQ13148 414 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 INPP5AQ14642 412 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 HES3Q5TGS1 186 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 RD3Q7Z3Z2 195 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ARHGAP12Q8IWW6 846 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 FSTL5Q8N475 847 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 NPWQ8N729 165 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF548Q8NEK5 533 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 NXPE2Q96DL1 559 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 APOLD1Q96LR9 279 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 DNAJC7Q99615 494 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 PCDH18Q9HCL0 1135 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 SALL4Q9UJQ4 1053 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 KMT2BQ9UMN6 2715 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 TSPAN11A1L157 253 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CPED1A4D0V7 1026 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 LMO7DNF2Z398 122 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 MAFKO60675 156 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 RASGRP1O95267 797 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CYP2A6P11509 494 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 PCSK2P16519 638 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ITIH2P19823 946 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 GJC1P36383 396 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 MMP12P39900 470 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ARHGAP25P42331 645 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 EPHB1P54762 984 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ADKP55263 362 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 SLC25A11Q02978 314 aaKnown RBP7.36□□□□□ -1.23
SCFD1-222ENST00000556768 CYP4F3Q08477 520 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ARHGEF7Q14155 803 aa7.36□□□□□ -1.23
SCFD1-222ENST00000556768 ACOX1Q15067 660 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms