RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 JCHAINP01591 159 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CHRM1P11229 460 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 HLA-EP13747 358 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 PGAM1P18669 254 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CES1P23141 567 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 PRKCHP24723 683 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 GPX6P59796 221 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CDH17Q12864 832 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ZBTB17Q13105 803 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SERINC3Q13530 473 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 LONRF1Q17RB8 773 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 KCTD19Q17RG1 926 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 MSS51Q4VC12 460 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 FAM133BQ5BKY9 247 aaKnown RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 MARC1Q5VT66 337 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 STEAP4Q687X5 459 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 NADSYN1Q6IA69 706 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ZNF534Q76KX8 674 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ANKMY2Q8IV38 441 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SFTPA1Q8IWL2 248 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 FAM217AQ8IXS0 508 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CPXM2Q8N436 756 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TEX26Q8N6G2 289 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 KIAA1958Q8N8K9 716 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ZNF557Q8N988 423 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 HJURPQ8NCD3 748 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 PTCD2Q8WV60 388 aaKnown RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CDKL2Q92772 493 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 IGSF8Q969P0 613 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CENPTQ96BT3 561 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 STAMBPL1Q96FJ0 436 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SIGLEC10Q96LC7 697 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CAPS2Q9BXY5 557 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 IL22Q9GZX6 179 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SUSD2Q9UGT4 822 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 RABGEF1Q9UJ41 708 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ZNF180Q9UJW8 692 aa14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TEP1Q99973 2627 aaKnown RBP14.38□□□□□ -0.11
TRAPPC6B-206ENST00000556765 IQANK1A0A1B0GTG1 560 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 RRP8O43159 456 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TLX3O43711 291 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ADAM23O75077 832 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 WISP1O95388 367 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 POLBP06746 335 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 HDCP19113 662 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 NFKB1P19838 968 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CNTFP26441 200 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 MSH2P43246 934 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SLC18A1P54219 525 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ILF2Q12905 390 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SMAD1Q15797 465 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ALFQ53S48 1182 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 MPP7Q5T2T1 576 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ADGRD1Q6QNK2 874 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 DENND1CQ8IV53 801 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 RGL4Q8IZJ4 473 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TAB3Q8N5C8 712 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 UHMK1Q8TAS1 419 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 FBF1Q8TES7 1133 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ARHGEF2Q92974 986 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TTC17Q96AE7 1141 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ALKBH8Q96BT7 664 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 AGAP3Q96P47 875 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CDC6Q99741 560 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 DHRS4Q9BTZ2 278 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SLC25A51Q9H1U9 297 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 LINC00597Q9H2U6 94 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SSU72Q9NP77 194 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CASS4Q9NQ75 786 aa14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 RBM22Q9NW64 420 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SPTAN1Q13813 2472 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 IGHV1OR15-9A0A0B4J2B8 117 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TCRBV9S1A1TA0A576 114 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 C2orf78A6NCI8 922 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 PRAMEF11O60813 436 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 CKMP06732 381 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 INHBAP08476 426 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 GNSP15586 552 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SSTR1P30872 391 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SERPINB9P50453 376 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 GNA12Q03113 381 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 GAD2Q05329 585 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 ZNF177Q13360 481 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 LAMB3Q13751 1172 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 GAB4Q2WGN9 574 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 Q6ZNB5 142 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 HTR3DQ70Z44 454 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TFAP2DQ7Z6R9 452 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 METTL3Q86U44 580 aaKnown RBP14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 LRRC6Q86X45 466 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 TP53INP2Q8IXH6 220 aa14.36□□□□□ -0.11
TRAPPC6B-206ENST00000556765 SH2D3CQ8N5H7 860 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms