RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 AP1S1P61966 158 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 OGDHQ02218 1023 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 RALGDSQ12967 914 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 ACOX1Q15067 660 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 KCTD16Q68DU8 428 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 LIPIQ6XZB0 460 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 RFX8Q6ZV50 586 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 NYAP1Q6ZVC0 841 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 DPPA4Q7L190 304 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 SPRED1Q7Z699 444 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 ECHDC3Q96DC8 303 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 ERGIC2Q96RQ1 377 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 SNRNP25Q9BV90 132 aaKnown RBP17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 CYP4F12Q9HCS2 524 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 MRPL40Q9NQ50 206 aaKnown RBP17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 PARVAQ9NVD7 372 aa17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 AKAP7Q9P0M2 348 aaPredicted RBP17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 HEMK1Q9Y5R4 338 aaPredicted RBP17.7■□□□□ 0.42
SDR39U1-219ENST00000556523 SYCE3A1L190 88 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 AGRPO00253 132 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 NOBOXO60393 691 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 RNF8O76064 485 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 ERCC2P18074 760 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 TNFAIP3P21580 790 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 NFKBIAP25963 317 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 RENBPP51606 427 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 IL10RBQ08334 325 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 PPP6R3Q5H9R7 873 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 ERMARDQ5T6L9 678 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 PHF19Q5T6S3 580 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 TMCO4Q5TGY1 634 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 SPECC1LQ69YQ0 1117 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 CMKLR1Q99788 373 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 ARHGAP9Q9BRR9 750 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 FUCA2Q9BTY2 467 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 TMEM168Q9H0V1 697 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 SUDS3Q9H7L9 328 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 LRIT1Q9P2V4 623 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 SEPT3Q9UH03 358 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 PCSK1NQ9UHG2 260 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 RNF215Q9Y6U7 377 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 SCN8AQ9UQD0 1980 aa17.69■□□□□ 0.42
SDR39U1-219ENST00000556523 PRSS38A1L453 326 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 TMCO5BA8MYB1 307 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 NVLO15381 856 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 TEX33O43247 280 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 ATMINO43313 823 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 NUDT21O43809 227 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 PRPSAP2O60256 369 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 HOXC4P09017 264 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 ITIH1P19827 911 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 SCNN1BP51168 640 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 BIRC2Q13490 618 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 HLTFQ14527 1009 aaKnown RBP eCLIP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 ZNF235Q14590 738 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 TGIF1Q15583 401 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 CA9Q16790 459 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 MANEAQ5SRI9 462 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 AFMIDQ63HM1 303 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 OGFOD3Q6PK18 319 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 PRICKLE2Q7Z3G6 844 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 NUS1Q96E22 293 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 SGF29Q96ES7 293 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 KCTD15Q96SI1 283 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 PHPT1Q9NRX4 125 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 PCDHB11Q9Y5F2 797 aa17.68■□□□□ 0.42
SDR39U1-219ENST00000556523 PIEZO2Q9H5I5 2752 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 PRAMEF33A0A0G2JMD5 474 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 A0A1W2PQ67 120 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 A8MX80 341 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ZW10O43264 779 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 EFSO43281 561 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 PRAMEF10O60809 474 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ZNF135P52742 658 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 MAPK10P53779 464 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ZFP36L1Q07352 338 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 NSUN2Q08J23 767 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ILF3Q12906 894 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 NFATC3Q12968 1075 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 MAMLD1Q13495 774 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 PNCKQ6P2M8 343 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ARHGAP12Q8IWW6 846 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ZSCAN1Q8NBB4 408 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 PDCD6IPQ8WUM4 868 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 PEBP4Q96S96 227 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 BPIFA3Q9BQP9 254 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 FAM117AQ9C073 453 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 CLMPQ9H6B4 373 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 CARS2Q9HA77 564 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 KCTD5Q9NXV2 234 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 TAS2R14Q9NYV8 317 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 B4GALT6Q9UBX8 382 aa17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 ARHGEF17Q96PE2 2063 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-219ENST00000556523 SPTA1P02549 2419 aa17.66■□□□□ 0.42
SDR39U1-219ENST00000556523 RHPN2P1A8MT19 583 aa17.66■□□□□ 0.42
SDR39U1-219ENST00000556523 CPP00450 1065 aa17.66■□□□□ 0.42
SDR39U1-219ENST00000556523 MYCLP1P12525 358 aaPredicted RBP17.66■□□□□ 0.42
SDR39U1-219ENST00000556523 TRIM23P36406 574 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms