RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 BTBD6Q96KE9 485 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 THAP2Q9H0W7 228 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 MRPL40Q9NQ50 206 aaKnown RBP22.67■■□□□ 1.22
ACTN1-220ENST00000556433 B4GALT6Q9UBX8 382 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 RABGEF1Q9UJ41 708 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 PCDHGA8Q9Y5G5 932 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 SHROOM3Q8TF72 1996 aa22.67■■□□□ 1.22
ACTN1-220ENST00000556433 A0A1W2PQ67 120 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 A0A1W2PQJ5 194 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 NTN3O00634 580 aaPredicted RBP22.66■■□□□ 1.22
ACTN1-220ENST00000556433 HTRA2O43464 458 aaPredicted RBP22.66■■□□□ 1.22
ACTN1-220ENST00000556433 MAFKO60675 156 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 HOXC4P09017 264 aaPredicted RBP22.66■■□□□ 1.22
ACTN1-220ENST00000556433 CR2P20023 1033 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 TRIM23P36406 574 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 PNCKQ6P2M8 343 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 TAF8Q7Z7C8 310 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 PGBD5Q8N414 524 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 NSMCE1Q8WV22 266 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 CPLX3Q8WVH0 158 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 SLC39A7Q92504 469 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 SYN2Q92777 582 aaPredicted RBP22.66■■□□□ 1.22
ACTN1-220ENST00000556433 NUDCD1Q96RS6 583 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 NOD2Q9HC29 1040 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 CBX8Q9HC52 389 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 PCDH18Q9HCL0 1135 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 FGF22Q9HCT0 170 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 IP6K2Q9UHH9 426 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 MOSPD1Q9UJG1 213 aa22.66■■□□□ 1.22
ACTN1-220ENST00000556433 TEX51A0A1B0GUA7 166 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 TNFRSF10CO14798 259 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 ATXN7O15265 892 aaPredicted RBP22.65■■□□□ 1.22
ACTN1-220ENST00000556433 KLK10O43240 276 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 SOCS5O75159 536 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 SERPING1P05155 500 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 UBASH3AP57075 661 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 CCL7P80098 99 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 NFKBIBQ15653 356 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 LUZP1Q86V48 1076 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 ATPAF2Q8N5M1 289 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 FAM46DQ8NEK8 389 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 OR6C4Q8NGE1 309 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 TEKT4Q8WW24 435 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 COQ10AQ96MF6 247 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 GFM1Q96RP9 751 aaKnown RBP22.65■■□□□ 1.22
ACTN1-220ENST00000556433 LGR4Q9BXB1 951 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 DPH1Q9BZG8 443 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 WDR26Q9H7D7 661 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 ANAPC7Q9UJX3 599 aa22.65■■□□□ 1.22
ACTN1-220ENST00000556433 CCDC187A0A096LP49 1063 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 PMS2P1A4D2B8 440 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 PDE2AO00408 941 aaPredicted RBP22.64■■□□□ 1.21
ACTN1-220ENST00000556433 TNFSF15O95150 251 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 CPP00450 1065 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 VIPR1P32241 457 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 PBX1P40424 430 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 PDX1P52945 283 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 MAXP61244 160 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 KRT81Q14533 505 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 MARC1Q5VT66 337 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 DENND2CQ68D51 928 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 OGFOD3Q6PK18 319 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 PELI3Q8N2H9 469 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 ARL14Q8N4G2 192 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 NIPA2Q8N8Q9 360 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 GPR156Q8NFN8 814 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 SPOCK2Q92563 424 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 MGME1Q9BQP7 344 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 NUP85Q9BW27 656 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 TMEM168Q9H0V1 697 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 CYP4F12Q9HCS2 524 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 PHTF1Q9UMS5 762 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 LOC400499M0QZD8 3231 aa22.64■■□□□ 1.21
ACTN1-220ENST00000556433 ANKRD36A6QL64 1941 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 SYCE3A1L190 88 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 TK2O00142 265 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 PRB1P04280 392 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 CYP1A2P05177 515 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 RPLP0P05388 317 aaKnown RBP22.63■■□□□ 1.21
ACTN1-220ENST00000556433 NFKBIAP25963 317 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 SERPINB6P35237 376 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 SSR1P43307 286 aaKnown RBP22.63■■□□□ 1.21
ACTN1-220ENST00000556433 UCNP55089 124 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 CDH6P55285 790 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 TMPRSS3P57727 454 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 ZBED6P86452 979 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 SLC25A11Q02978 314 aaKnown RBP22.63■■□□□ 1.21
ACTN1-220ENST00000556433 TRAF2Q12933 501 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 CNGA3Q16281 694 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 NUS1Q96E22 293 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 LRRN3Q9H3W5 708 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 CPNE5Q9HCH3 593 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 CAPN11Q9UMQ6 739 aa22.63■■□□□ 1.21
ACTN1-220ENST00000556433 COL27A1Q8IZC6 1860 aaPredicted RBP22.62■■□□□ 1.21
ACTN1-220ENST00000556433 A0A087X0T9 212 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 A0A1W2PQM1 296 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 TMX2-CTNND1H3BSU7 103 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 MYO1FO00160 1098 aa22.62■■□□□ 1.21
ACTN1-220ENST00000556433 HEXIM1O94992 359 aaKnown RBP22.62■■□□□ 1.21
ACTN1-220ENST00000556433 FAM228BP0C875 321 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms