RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MMGT1Q8N4V1 131 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 LRRN4CLQ8ND94 238 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 ATOH1Q92858 354 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 SNF8Q96H20 258 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 MYOCQ99972 504 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 ERP44Q9BS26 406 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 GPR63Q9BZJ6 419 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 RAB17Q9H0T7 212 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 PPIL1Q9Y3C6 166 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 ZNF711Q9Y462 761 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 SLC31A1O15431 190 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 TMEM63AO94886 807 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 SUN1O94901 812 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 HEXIM1O94992 359 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 CLDN7O95471 211 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 C6P13671 934 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 TPSB2P20231 275 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 SARNPP82979 210 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 CDH17Q12864 832 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 SGCGQ13326 291 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 SEPT6Q14141 434 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 TPSAB1Q15661 275 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 RNASEH2BQ5TBB1 312 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 DENND5AQ6IQ26 1287 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 KIAA1161Q6NSJ0 714 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 GLT6D1Q7Z4J2 308 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 BIRC7Q96CA5 298 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 MIR1-1HGQ9H1L0 117 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 MAGEE1Q9HCI5 957 aa14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 ZFR2Q9UPR6 939 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-208ENST00000556412 AURKAO14965 403 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 BUD23O43709 281 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 TM7SF2O76062 418 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 PTGER3P43115 390 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 RPL21P46778 160 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 POU6F1Q14863 301 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 PLK5Q496M5 336 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 NEK5Q6P3R8 708 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 LIPIQ6XZB0 460 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 PCGF5Q86SE9 256 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 SLC41A1Q8IVJ1 513 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 RGL4Q8IZJ4 473 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CADM4Q8NFZ8 388 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 FOXJ1Q92949 421 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 ZFYVE1Q9HBF4 777 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 FAM86C1Q9NVL1 165 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 ANAPC5Q9UJX4 755 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 FNDC3AQ9Y2H6 1198 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CUL9Q8IWT3 2517 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 KMT2EQ8IZD2 1858 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 ESYT3A0FGR9 886 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 METTL12A8MUP2 240 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 LILRB5O75023 590 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 PAK4O96013 591 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 IGHV4-34P06331 123 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 IVDP26440 423 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 MAOBP27338 520 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 ITGA8P53708 1063 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 PTPN5P54829 565 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CDK16Q00536 496 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CALCOCO2Q13137 446 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 ZNF284Q2VY69 593 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CERCAMQ5T4B2 595 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 HSD11B1LQ7Z5J1 315 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 NAT8LQ8N9F0 302 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 LYSMD1Q96S90 227 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 SRPK1Q96SB4 655 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 SLC17A9Q9BYT1 436 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 DUSP15Q9H1R2 295 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 ARNT2Q9HBZ2 717 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 FZD3Q9NPG1 666 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 HACD3Q9P035 362 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 CD84Q9UIB8 345 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 HCN4Q9Y3Q4 1203 aa14.06□□□□□ -0.16
VIPAS39-208ENST00000556412 MYO18AQ92614 2054 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 ATXN2Q99700 1313 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 CCDC78A2IDD5 438 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 AVILO75366 819 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 RECQL5O94762 991 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 RHOBTB1O94844 696 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 SEC31AO94979 1220 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 RHOXF2BP0C7M4 288 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 ZNF30P17039 623 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 ETV3P41162 512 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 MAGEA6P43360 314 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 CCR5P51681 352 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 PTSQ03393 145 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 TMEM259Q4ZIN3 620 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 CCDC38Q502W7 563 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 SETMARQ53H47 684 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 LYSMD4Q5XG99 296 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 RHOXF2Q9BQY4 288 aa14.05□□□□□ -0.16
VIPAS39-208ENST00000556412 PCED1AQ9H1Q7 454 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms