RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 GATA5Q9BWX5 397 aaPredicted RBP10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 SLC46A2Q9BY10 475 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 NMUR2Q9GZQ4 415 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 DRC3Q9H069 523 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 ILKAPQ9H0C8 392 aaPredicted RBP10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 PNPOQ9NVS9 261 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 DNAJC28Q9NX36 388 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 HACD3Q9P035 362 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 MARCH4Q9P2E8 410 aaPredicted RBP10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 DNMT3BQ9UBC3 853 aaKnown RBP10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 ARHGAP26Q9UNA1 814 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 TRIM33Q9UPN9 1127 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 SORCS3Q9UPU3 1222 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 CRYL1Q9Y2S2 319 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 RWDD3Q9Y3V2 267 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 NUMBLQ9Y6R0 609 aa10.12□□□□□ -0.79
EFCAB11-209ENST00000556005 KIAA1671Q9BY89 1806 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PLXNA4Q9HCM2 1894 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PFDN6O15212 129 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 MGRN1O60291 552 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 SNUPNO95149 360 aaKnown RBP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 RBP1P09455 135 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 ALOX15P16050 662 aaPredicted RBP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 GJA1P17302 382 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PTPN2P17706 415 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 LPOP22079 712 aaPredicted RBP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PSMA3P25788 255 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 DDX6P26196 483 aaKnown RBP eCLIP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 GRIA4P48058 902 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 CLCN4P51793 760 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 ZNF140P52738 457 aaPredicted RBP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 HK2P52789 917 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 STC1P52823 247 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 AP1S1P61966 158 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 SLC20A2Q08357 652 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 DLG1Q12959 904 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PTPRCAPQ14761 206 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 CFAP157Q5JU67 520 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PLPP4Q5VZY2 271 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 SPATA6LQ8N4H0 392 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 OR4K2Q8NGD2 314 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 FIBINQ8TAL6 211 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 WFDC5Q8TCV5 224 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 SLC22A17Q8WUG5 538 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 POF1BQ8WVV4 589 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 CCDC126Q96EE4 140 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 UBXN10Q96LJ8 280 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 TCF12Q99081 682 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 TLR9Q9NR96 1032 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 IGSF5Q9NSI5 407 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 INTS10Q9NVR2 710 aaKnown RBP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 FCF1Q9Y324 198 aaKnown RBP10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 SPO11Q9Y5K1 396 aa10.11□□□□□ -0.79
EFCAB11-209ENST00000556005 CXorf51AA0A1B0GTR3 108 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 DLX3O60479 287 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 CCDC166P0CW27 439 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 ESRRAP11474 423 aaPredicted RBP10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 ATP5F1P24539 256 aaPredicted RBP10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 HNRNPH1P31943 449 aaKnown RBP10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 ARRB2P32121 409 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 SLC8A1P32418 973 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 MAPK8P45983 427 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 EPHB1P54762 984 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 NAGLUP54802 743 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 UBE3AQ05086 875 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 TRAF2Q12933 501 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 RCN2Q14257 317 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 TYSND1Q2T9J0 566 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 ARHGAP15Q53QZ3 475 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 GPR158Q5T848 1215 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 ATG14Q6ZNE5 492 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 APCDD1Q8J025 514 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 DNAJC5GQ8N7S2 189 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 SPPL3Q8TCT6 385 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 HERVK_113Q902F9 699 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 SLC7A6OSQ96CW6 309 aaPredicted RBP10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 EBF4Q9BQW3 602 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 CDH19Q9H159 772 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 POPDC3Q9HBV1 291 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 PLK2Q9NYY3 685 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 NCKIPSDQ9NZQ3 722 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 STK38LQ9Y2H1 464 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 RAP2CQ9Y3L5 183 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 PTPRSQ13332 1948 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 LCHNA4D1U4 455 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 SOBPA7XYQ1 873 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 SLCO1B7G3V0H7 640 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 STX7O15400 261 aaKnown RBP10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 FZD6O60353 706 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 CSPG5O95196 566 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 MT-CO1P00395 513 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 KRT16P08779 473 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 FDXRP22570 491 aa10.1□□□□□ -0.79
EFCAB11-209ENST00000556005 SERPINB5P36952 375 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms