RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 PHACTR1Q9C0D0 580 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 ZFYVE1Q9HBF4 777 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 WSB2Q9NYS7 404 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 B4GALT6Q9UBX8 382 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 MTRF1LQ9UGC7 380 aaKnown RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CKAP5Q14008 2032 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3DA0A087WVF3 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3IA0A087WXS9 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3EA0A087X179 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3KA0A087X1G2 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 HEATR9A2RTY3 570 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 RGSL1A5PLK6 1076 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3FA6NER0 549 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 NPIPB15A6NHN6 443 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3LB9A6J9 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PSMD11O00231 422 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PRKCGP05129 697 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 ALPIP09923 528 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3HP0C7X1 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 HMGCLP35914 325 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 ADPRHP54922 357 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 RPS21P63220 83 aaKnown RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PTSQ03393 145 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 MAP7D1Q3KQU3 841 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 FNBP1LQ5T0N5 605 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 CERCAMQ5T4B2 595 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3GQ6DHY5 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3CQ6IPX1 549 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 WDR93Q6P2C0 686 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 LIPIQ6XZB0 460 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 SLC36A4Q6YBV0 504 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 CENPUQ71F23 418 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 GLT6D1Q7Z4J2 308 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TBC1D3Q8IZP1 549 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 CXorf40AQ8TE69 158 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PEX13Q92968 403 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 SPACA7Q96KW9 195 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 SIGLEC10Q96LC7 697 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 NAT9Q9BTE0 207 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 GPR63Q9BZJ6 419 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 CDH19Q9H159 772 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PCED1AQ9H1Q7 454 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 ANKZF1Q9H8Y5 726 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 RAD18Q9NS91 495 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 PIH1D1Q9NWS0 290 aaKnown RBP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 KCTD5Q9NXV2 234 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHMT2-221ENST00000555773 RIMKLBQ9ULI2 386 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 CYP8B1Q9UNU6 501 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 ZNF711Q9Y462 761 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 SPO11Q9Y5K1 396 aa12.49□□□□□ -0.41
SHMT2-221ENST00000555773 IGHV1OR15-9A0A0B4J2B8 117 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 FAM86C2PA6NEL3 165 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 MROH6A6NGR9 719 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 E7ESA3 106 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 SPINT1O43278 529 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 AVILO75366 819 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 PCDH8O95206 1070 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 CLDN7O95471 211 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 SEMA4FO95754 770 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 PIRTP0C851 137 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 LPOP22079 712 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-221ENST00000555773 PSMA3P25788 255 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 MGAT1P26572 445 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 ACSL1P33121 698 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 CNR2P34972 360 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 LIG3P49916 1009 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 PTPN5P54829 565 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 CREB5Q02930 508 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 RALGDSQ12967 914 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 POU6F1Q14863 301 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 LRRC73Q5JTD7 316 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 ZDHHC20Q5W0Z9 365 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 LRRC66Q68CR7 880 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 KIAA1161Q6NSJ0 714 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 TSSK4Q6SA08 328 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 C11orf74Q86VG3 221 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 HORMAD1Q86X24 394 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 TTC30BQ8N4P2 665 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 PPHLN1Q8NEY8 458 aaKnown RBP12.48□□□□□ -0.41
SHMT2-221ENST00000555773 CADM4Q8NFZ8 388 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 STYXQ8WUJ0 223 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 ASB12Q8WXK4 309 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 NELL1Q92832 810 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 TOE1Q96GM8 510 aaKnown RBP12.48□□□□□ -0.41
SHMT2-221ENST00000555773 KIFC1Q9BW19 673 aa12.48□□□□□ -0.41
SHMT2-221ENST00000555773 MRM3Q9HC36 420 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms