RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 TNFP01375 233 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 GM2AP17900 193 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 NFKBIAP25963 317 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 VIPR1P32241 457 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 GARSP41250 739 aaKnown RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 KIAA1024LP59773 190 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 GALNT2Q10471 571 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 TRAF2Q12933 501 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 ACOX1Q15067 660 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 PAFAH1B3Q15102 231 aaKnown RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 PDK2Q15119 407 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 ASTE1Q2TB18 679 aaPredicted RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 NCBP2-AS2Q69YL0 99 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 ESRP1Q6NXG1 681 aaKnown RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 LVRNQ6Q4G3 990 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 SDR16C5Q8N3Y7 309 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 KCTD6Q8NC69 237 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 PCDH19Q8TAB3 1148 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 SCG3Q8WXD2 468 aaKnown RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 NAT6Q93015 286 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 FUBP1Q96AE4 644 aaKnown RBP13.85□□□□□ -0.19
PCNX4-209ENST00000555569 PDXPQ96GD0 296 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 COQ10AQ96MF6 247 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 ZNF670Q9BS34 389 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 TSPY26PQ9H489 355 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 NT5MQ9NPB1 228 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 LCMT1Q9UIC8 334 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 ITPR1Q14643 2758 aa13.85□□□□□ -0.19
PCNX4-209ENST00000555569 AKR1B10O60218 316 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 HEXIM1O94992 359 aaKnown RBP13.84□□□□□ -0.19
PCNX4-209ENST00000555569 KRT7P08729 469 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 HOXC4P09017 264 aaPredicted RBP13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TPM1P09493 284 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TMEM253P0C7T8 217 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 CYP2A6P11509 494 aaPredicted RBP13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TGM2P21980 687 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 KELP23276 732 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 MAN1A1P33908 653 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TRIM23P36406 574 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TAS2R40P59535 323 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TCEA2Q15560 299 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 CNGA3Q16281 694 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TSR1Q2NL82 804 aaKnown RBP13.84□□□□□ -0.19
PCNX4-209ENST00000555569 ANKRD20A8PQ5CZ79 823 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 PERM1Q5SV97 790 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 ARMC12Q5T9G4 340 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TIGD7Q6NT04 549 aaPredicted RBP13.84□□□□□ -0.19
PCNX4-209ENST00000555569 NYAP1Q6ZVC0 841 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 GKN2Q86XP6 184 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 VSTM4Q8IW00 320 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 MAP7D3Q8IWC1 876 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 OR56A4Q8NGH8 313 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 SNIP1Q8TAD8 396 aaKnown RBP13.84□□□□□ -0.19
PCNX4-209ENST00000555569 OR1E3Q8WZA6 343 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 NUS1Q96E22 293 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 WDR26Q9H7D7 661 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 KCTD5Q9NXV2 234 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 PADI4Q9UM07 663 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 GPR34Q9UPC5 381 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 DGKBQ9Y6T7 804 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 UNC13CQ8NB66 2214 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 PTPRQQ9UMZ3 2332 aa13.84□□□□□ -0.19
PCNX4-209ENST00000555569 TMEM202A6NGA9 273 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 TNFRSF10CO14798 259 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 USP12O75317 370 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 PGLSO95336 258 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 ACTN2P35609 894 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 EIF2S3P41091 472 aaKnown RBP13.83□□□□□ -0.2
PCNX4-209ENST00000555569 ITKQ08881 620 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 IFI16Q16666 785 aaKnown RBP13.83□□□□□ -0.2
PCNX4-209ENST00000555569 ISXQ2M1V0 245 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 DENND2CQ68D51 928 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 PNCKQ6P2M8 343 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 CRTC1Q6UUV9 634 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 LRRC69Q6ZNQ3 347 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 USP45Q70EL2 814 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 PDZD3Q86UT5 571 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 PELI3Q8N2H9 469 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 ARL10Q8N8L6 244 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 KYQ8NBH2 561 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 WDR48Q8TAF3 677 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 MAML1Q92585 1016 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 FAF2Q96CS3 445 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 SCRN2Q96FV2 425 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 RBM15Q96T37 977 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCNX4-209ENST00000555569 CHP1Q99653 195 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 SEMA3CQ99985 751 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
PCNX4-209ENST00000555569 FGF22Q9HCT0 170 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 ABHD10Q9NUJ1 306 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 SIRPGQ9P1W8 387 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 RAI2Q9Y5P3 530 aa13.83□□□□□ -0.2
PCNX4-209ENST00000555569 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms