RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CCNYL2Q5T2Q4 361 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 JMJD6Q6NYC1 403 aaPredicted RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 WDR73Q6P4I2 378 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 GFRALQ6UXV0 394 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 CEACAM20Q6UY09 585 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 PRSS45Q7RTY3 260 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 PARP16Q8N5Y8 322 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 FGFBP3Q8TAT2 258 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 RND1Q92730 232 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 SNAPC3Q92966 411 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 CRB3Q9BUF7 120 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 CDK19Q9BWU1 502 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 TWSG1Q9GZX9 223 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 TTC12Q9H892 705 aaPredicted RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 ZDHHC18Q9NUE0 388 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 GEMIN8Q9NWZ8 242 aaKnown RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 IFT80Q9P2H3 777 aaPredicted RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 NFE2L3Q9Y4A8 694 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 ATXN2Q99700 1313 aaKnown RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 TAF1P21675 1872 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 A0A0U1RQF3 1178 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 ASPDHA6ND91 283 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 HSPB2A8KAH6 182 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 STX16-NPEPL1H3BU86 382 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 STX16O14662 325 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 PLRG1O43660 514 aaKnown RBP2.92□□□□□ -1.94
SRP54-207ENST00000555535 CSTBP04080 98 aaKnown RBP2.92□□□□□ -1.94
SRP54-207ENST00000555535 SETSIPP0DME0 302 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 STX2P32856 288 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 ICA1Q05084 483 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 FOXO1Q12778 655 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 ARHGEF6Q15052 776 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 HSPB2Q16082 182 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 TIGD6Q17RP2 521 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 IRAK1BP1Q5VVH5 260 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 IL20RBQ6UXL0 311 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 MOB3CQ70IA8 216 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 TMEM219Q86XT9 240 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 FOXRED2Q8IWF2 684 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 GJC3Q8NFK1 279 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 BBS10Q8TAM1 723 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 SLC20A1Q8WUM9 679 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 OPRPNQ99935 248 aaPredicted RBP2.92□□□□□ -1.94
SRP54-207ENST00000555535 LMAN2LQ9H0V9 348 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 PRO0461Q9UI25 63 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 TINAGQ9UJW2 476 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 RALYQ9UKM9 306 aaKnown RBP2.92□□□□□ -1.94
SRP54-207ENST00000555535 A3GALT2U3KPV4 340 aa2.92□□□□□ -1.94
SRP54-207ENST00000555535 TYW5A2RUC4 315 aaKnown RBP2.91□□□□□ -1.94
SRP54-207ENST00000555535 ARHGEF9O43307 516 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 KLK8O60259 260 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 FAM155BO75949 473 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 PATE4P0C8F1 98 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 TNNT1P13805 278 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 MCM2P49736 904 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 CLK1P49759 484 aaKnown RBP2.91□□□□□ -1.94
SRP54-207ENST00000555535 UGP2Q16851 508 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 PPP6R3Q5H9R7 873 aaPredicted RBP2.91□□□□□ -1.94
SRP54-207ENST00000555535 FAM83BQ5T0W9 1011 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 CCNI2Q6ZMN8 369 aaPredicted RBP2.91□□□□□ -1.94
SRP54-207ENST00000555535 TOGARAM2Q6ZUX3 1019 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 CHERPQ8IWX8 916 aaKnown RBP2.91□□□□□ -1.94
SRP54-207ENST00000555535 SLC24A4Q8NFF2 622 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 TWNKQ96RR1 684 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 FSD1Q9BTV5 496 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 ERVMER34-1Q9H9K5 563 aa2.91□□□□□ -1.94
SRP54-207ENST00000555535 CISD1Q9NZ45 108 aaKnown RBP2.91□□□□□ -1.94
SRP54-207ENST00000555535 ABHD14A-ACY1A0A1B0GW23 586 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 NDUFB4O95168 129 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 CHRM4P08173 479 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 VEGFAP15692 232 aaPredicted RBP2.9□□□□□ -1.95
SRP54-207ENST00000555535 ITGA2P17301 1181 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 CLDN2P57739 230 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 MMEL1Q495T6 779 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 ZDHHC20Q5W0Z9 365 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 ANKRD54Q6NXT1 300 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 DENND1BQ6P3S1 775 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 C17orf99Q6UX52 265 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 NOXA1Q86UR1 476 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 SVIPQ8NHG7 77 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 DUSP19Q8WTR2 217 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 ABTB1Q969K4 478 aaPredicted RBP2.9□□□□□ -1.95
SRP54-207ENST00000555535 LRR1Q96L50 414 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.9□□□□□ -1.95
SRP54-207ENST00000555535 KCNN2Q9H2S1 579 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 SLC32A1Q9H598 525 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 PLEKHA5Q9HAU0 1116 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 TMEM30AQ9NV96 361 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 PCDHGB5Q9Y5G0 923 aa2.9□□□□□ -1.95
SRP54-207ENST00000555535 C17orf113A0A1B0GUU1 675 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 PABPN1LA6NDY0 278 aaKnown RBP2.89□□□□□ -1.95
SRP54-207ENST00000555535 FAM90A7PA6NKC0 464 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 FAM90A22PA8MWA6 464 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 FAM90A12PA8MX19 464 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 FAM90A23PA8MXZ1 464 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 NR5A2O00482 541 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 PPM1GO15355 546 aaPredicted RBP2.89□□□□□ -1.95
SRP54-207ENST00000555535 PRC1O43663 620 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 CEP104O60308 925 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 ZNF8P17098 575 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms