RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ZNF33AQ06730 810 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 AP1B1Q10567 949 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 PLEKHG6Q3KR16 790 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 PKN3Q6P5Z2 889 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 TLDC1Q6P9B6 456 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 SETD3Q86TU7 594 aaPredicted RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 TP53INP2Q8IXH6 220 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 ARHGAP24Q8N264 748 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 MPP5Q8N3R9 675 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 PDCD7Q8N8D1 485 aaKnown RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 ENDOVQ8N8Q3 282 aaKnown RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 FAM13CQ8NE31 585 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 ARMC2Q8NEN0 867 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 RNPEPL1Q9HAU8 725 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 KIAA1522Q9P206 1035 aaPredicted RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 MUC6Q6W4X9 2439 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 KMT2EQ8IZD2 1858 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 FAM86C2PA6NEL3 165 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 GARSP41250 739 aaKnown RBP17.48■□□□□ 0.39
SHOX-204ENST00000554971 MAPKAPK2P49137 400 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 BST1Q10588 318 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 WASHC5Q12768 1159 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 MROH9Q5TGP6 573 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 OR7D4Q8NG98 312 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 SLC13A1Q9BZW2 595 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 DLGAP2Q9P1A6 1054 aa17.48■□□□□ 0.39
SHOX-204ENST00000554971 DCNP07585 359 aaKnown RBP17.47■□□□□ 0.39
SHOX-204ENST00000554971 MYL2P10916 166 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 SERPINB3P29508 390 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 ACVRL1P37023 503 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 CTSOP43234 321 aaPredicted RBP17.47■□□□□ 0.39
SHOX-204ENST00000554971 STX3Q13277 289 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 TEX44Q53QW1 395 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PITRM1Q5JRX3 1037 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 GRTP1Q5TC63 336 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 RNF219Q5W0B1 726 aaPredicted RBP17.47■□□□□ 0.39
SHOX-204ENST00000554971 CASC4Q6P4E1 433 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PACS1Q6VY07 963 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 UMODL1-AS1Q8N2C9 162 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 CLDN23Q96B33 292 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 MFSD1Q9H3U5 465 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 RETREG1Q9H6L5 497 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 LMAN1LQ9HAT1 526 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 ELOVL2Q9NXB9 296 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 MRPS17Q9Y2R5 130 aaKnown RBP17.47■□□□□ 0.39
SHOX-204ENST00000554971 ILVBLA1L0T0 632 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 STK25O00506 426 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 RHOCP08134 193 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 GLDCP23378 1020 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 GRIA1P42261 906 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PLK1P53350 603 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 SEC13P55735 322 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PPIDQ08752 370 aaKnown RBP17.47■□□□□ 0.39
SHOX-204ENST00000554971 CRYMQ14894 314 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 CHI3L2Q15782 390 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PTPRNQ16849 979 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 MBLAC2Q68D91 279 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 ARHGAP12Q8IWW6 846 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 ZNF567Q8N184 647 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 ZNF557Q8N988 423 aaPredicted RBP17.47■□□□□ 0.39
SHOX-204ENST00000554971 CCNYQ8ND76 341 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 MYO19Q96H55 970 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 ACOX2Q99424 681 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 NELL2Q99435 816 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 CPNE1Q99829 537 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 OSBPL6Q9BZF3 934 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PCMTD2Q9NV79 361 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 C2orf42Q9NWW7 574 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 SIT1Q9Y3P8 196 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 L3MBTL1Q9Y468 752 aa17.47■□□□□ 0.39
SHOX-204ENST00000554971 PSMD3O43242 534 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 UGT1A9O60656 530 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 ESRRAP11474 423 aaPredicted RBP17.46■□□□□ 0.39
SHOX-204ENST00000554971 AOC1P19801 751 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 GRK2P25098 689 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 SERPINB6P35237 376 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 GP5P40197 560 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 TNFRSF4P43489 277 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 GNA12Q03113 381 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 BMPR2Q13873 1038 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 C2orf27AQ580R0 203 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 AFMIDQ63HM1 303 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 EGFLAMQ63HQ2 1017 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 ITPRIPL1Q6GPH6 555 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 PID1Q7Z2X4 250 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 CYB5D2Q8WUJ1 264 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 ISL2Q96A47 359 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 PBXIP1Q96AQ6 731 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 CELF6Q96J87 481 aaKnown RBP17.46■□□□□ 0.39
SHOX-204ENST00000554971 DCLRE1BQ9H816 532 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 UGT1A7Q9HAW7 530 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 UGT1A10Q9HAW8 530 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 UGT1A8Q9HAW9 530 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 BATF3Q9NR55 127 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 POLR3BQ9NW08 1133 aaPredicted RBP17.46■□□□□ 0.39
SHOX-204ENST00000554971 BFARQ9NZS9 450 aa17.46■□□□□ 0.39
SHOX-204ENST00000554971 TXNDC16Q9P2K2 825 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms