RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 CACNB4O00305 520 aaPredicted RBP11.91□□□□□ -0.5
PSMC6-207ENST00000554952 MAFKO60675 156 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 PEX11BO96011 259 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 GYPCP04921 128 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 SERPINB6P35237 376 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 LSSP48449 732 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 MAXP61244 160 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 GABREP78334 506 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 SLC25A11Q02978 314 aaKnown RBP11.91□□□□□ -0.5
PSMC6-207ENST00000554952 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
PSMC6-207ENST00000554952 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 ATP13A4Q4VNC1 1196 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 MARC1Q5VT66 337 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 DENND2CQ68D51 928 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 LVRNQ6Q4G3 990 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 RBM44Q6ZP01 1051 aaKnown RBP11.91□□□□□ -0.5
PSMC6-207ENST00000554952 GKN2Q86XP6 184 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 NAT6Q93015 286 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 FUBP1Q96AE4 644 aaKnown RBP11.91□□□□□ -0.5
PSMC6-207ENST00000554952 NUDCD1Q96RS6 583 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 SYNDIG1Q9H7V2 258 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 B4GALT6Q9UBX8 382 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 MOSPD1Q9UJG1 213 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
PSMC6-207ENST00000554952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■□□□□ 10.9
PSMC6-207ENST00000554952 A0A1W2PQ67 120 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 TMEM202A6NGA9 273 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 CASC3O15234 703 aaKnown RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 HTRA2O43464 458 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 CD48P09326 243 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 CR2P20023 1033 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 IL4RP24394 825 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 GJC1P36383 396 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 MMP13P45452 471 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 ITKQ08881 620 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 ZSCAN23Q3MJ62 389 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 SOWAHCQ53LP3 525 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 KCTD16Q68DU8 428 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 PNCKQ6P2M8 343 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 TAF8Q7Z7C8 310 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 SDR16C5Q8N3Y7 309 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 KCTD6Q8NC69 237 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 OR56A4Q8NGH8 313 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 ZNF564Q8TBZ8 553 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 OR1E3Q8WZA6 343 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 NAF1Q96HR8 494 aaKnown RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 LGR4Q9BXB1 951 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 MRPL40Q9NQ50 206 aaKnown RBP11.9□□□□□ -0.5
PSMC6-207ENST00000554952 CTTNBP2NLQ9P2B4 639 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 PHTF1Q9UMS5 762 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
PSMC6-207ENST00000554952 ARHGEF17Q96PE2 2063 aaPredicted RBP11.9□□□□□ -0.51
PSMC6-207ENST00000554952 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.51
PSMC6-207ENST00000554952 SOCS5O75159 536 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 CPP00450 1065 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 TPM3P06753 285 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 CYP2A6P11509 494 aaPredicted RBP11.89□□□□□ -0.51
PSMC6-207ENST00000554952 GM2AP17900 193 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 KELP23276 732 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 NFKBIAP25963 317 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 RBMS1P29558 406 aaKnown RBP11.89□□□□□ -0.51
PSMC6-207ENST00000554952 VIPR1P32241 457 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 TRIM23P36406 574 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 KIAA1024LP59773 190 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSMC6-207ENST00000554952 TRAF2Q12933 501 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 PTPRRQ15256 657 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 C3orf38Q5JPI3 329 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 RALGPS1Q5JS13 557 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 FOXR1Q6PIV2 292 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 CPNE8Q86YQ8 564 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 LRRC49Q8IUZ0 686 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSMC6-207ENST00000554952 ARL10Q8N8L6 244 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 KYQ8NBH2 561 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 FAM46DQ8NEK8 389 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 GRAMD1AQ96CP6 724 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 COQ10AQ96MF6 247 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 RBM15Q96T37 977 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSMC6-207ENST00000554952 LGMNQ99538 433 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 MGME1Q9BQP7 344 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 WDR26Q9H7D7 661 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 CYP4F12Q9HCS2 524 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 FGF22Q9HCT0 170 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 NT5MQ9NPB1 228 aa11.89□□□□□ -0.51
PSMC6-207ENST00000554952 RCOR3Q9P2K3 495 aaPredicted RBP11.89□□□□□ -0.51
PSMC6-207ENST00000554952 SATB2Q9UPW6 733 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms