RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MGRN1O60291 552 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 MTA2O94776 668 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 CXCR2P25025 360 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 MPSTP25325 297 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 CDK18Q07002 472 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 FNBP1LQ5T0N5 605 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 LIN54Q6MZP7 749 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 DSG4Q86SJ6 1040 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 OR4L1Q8NH43 312 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 ELMO1Q92556 727 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SLC47A1Q96FL8 570 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 S100A13Q99584 98 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 RHOBTB2Q9BYZ6 727 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SAMHD1Q9Y3Z3 626 aaKnown RBP13.99□□□□□ -0.17
VTI1B-204ENST00000554659 HAT1O14929 419 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 B4GALT4O60513 344 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 LPOP22079 712 aaPredicted RBP13.99□□□□□ -0.17
VTI1B-204ENST00000554659 ABL2P42684 1182 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 BLMHQ13867 455 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 PYDC2Q56P42 97 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 LCLAT1Q6UWP7 414 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF572Q7Z3I7 529 aaPredicted RBP13.99□□□□□ -0.17
VTI1B-204ENST00000554659 HPS6Q86YV9 775 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 CERS5Q8N5B7 392 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 LRRC17Q8N6Y2 441 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 C12orf29Q8N999 325 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 LRRN4Q8WUT4 740 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 EEF1AKMT1Q8WVE0 214 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SLC9A7Q96T83 725 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 ADAM2Q99965 735 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 VPS4AQ9UN37 437 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 A0A088AWK7 358 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 A0A0J9YYE9 177 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 H3BNX3 289 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 QSOX1O00391 747 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 DNM1LO00429 736 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SIN3BO75182 1162 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF10P21506 573 aaPredicted RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CDH3P22223 829 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 RPL9P32969 192 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PABPC1LQ4VXU2 614 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 RNASEH2BQ5TBB1 312 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 TAF8Q7Z7C8 310 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PGAM4Q8N0Y7 254 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 NFKBIZQ9BYH8 718 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 ST6GALNAC4Q9H4F1 302 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 EURLQ9NYK6 297 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 EGFL7Q9UHF1 273 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SQORQ9Y6N5 450 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CAPN8A6NHC0 703 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 ECDO95905 644 aaPredicted RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PPIBP23284 216 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PTGIRP43119 386 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 WNT3AP56704 352 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SNRPD1P62314 119 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 MTX3Q5HYI7 312 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 ARMC8Q8IUR7 673 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 ZFP28Q8NHY6 868 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PHF10Q8WUB8 498 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 HDAC10Q969S8 669 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CSPG4P5Q96PW8 444 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PDCD10Q9BUL8 212 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 DENND2DQ9H6A0 471 aaPredicted RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 WDR55Q9H6Y2 383 aaPredicted RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 RPRD1BQ9NQG5 326 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 NUDT14O95848 222 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SGCGQ13326 291 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 LIN52Q52LA3 116 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 EEF1DP3Q658K8 133 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 TATDN1Q6P1N9 297 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SMYD1Q8NB12 490 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SLC4A11Q8NBS3 891 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 ING4Q9UNL4 249 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 HES2Q9Y543 173 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 MYPNQ86TC9 1320 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 G3V2T6 193 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PSMD11O00231 422 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 B4GALT5O43286 388 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CYP4F2P78329 520 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CYP4F3Q08477 520 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 HECTD3Q5T447 861 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 GK5Q6ZS86 529 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 APTXQ7Z2E3 356 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 METTL3Q86U44 580 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 DSELQ8IZU8 1212 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CNTD1Q8N815 330 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 PTCD2Q8WV60 388 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 SLC38A2Q96QD8 506 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 NOL11Q9H8H0 719 aaKnown RBP13.98□□□□□ -0.17
VTI1B-204ENST00000554659 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
VTI1B-204ENST00000554659 CDK9P50750 372 aaKnown RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 SCIMPQ6UWF3 145 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 OR2T34Q8NGX1 318 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 OR2T3Q8NH03 318 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 COPS5Q92905 334 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 GLOD4Q9HC38 313 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PCDHGC3Q9UN70 934 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 A0A1W2PRG6 482 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms