RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 IGF2-ASQ6U949 168 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF354CQ86Y25 554 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 UMODL1-AS1Q8N2C9 162 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF843Q8N446 348 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 CEP112Q8N8E3 955 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 KYQ8NBH2 561 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 SLC35G2Q8TBE7 412 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 CXorf40AQ8TE69 158 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 FUBP1Q96AE4 644 aaKnown RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ARHGEF26Q96DR7 871 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 NSMCE3Q96MG7 304 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 IL12RB2Q99665 862 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 CPEB1Q9BZB8 566 aaKnown RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 THAP2Q9H0W7 228 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ABCG4Q9H172 646 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 LRRC19Q9H756 370 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 MRPL47Q9HD33 250 aaKnown RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 PCDH12Q9NPG4 1184 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 RNF14Q9UBS8 474 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 HYOU1Q9Y4L1 999 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 SAR1BQ9Y6B6 198 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 AHCTF1Q8WYP5 2266 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ASH1LQ9NR48 2969 aaKnown RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 TEX51A0A1B0GUA7 166 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CDRT15L2A8MXV6 281 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 NTN3O00634 580 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 YY2O15391 372 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 PALMO75781 387 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 ATP1A1P05023 1023 aaKnown RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 PRKCGP05129 697 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 C6P13671 934 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 MMP12P39900 470 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 YPEL5P62699 121 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CA9Q16790 459 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 PARP15Q460N3 678 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 FAXCQ5TGI0 409 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 RBM44Q6ZP01 1051 aaKnown RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 B3GNT8Q7Z7M8 397 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 DNAAF5Q86Y56 855 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 ARFGAP1Q8N6T3 406 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 MNS1Q8NEH6 495 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 PCDH19Q8TAB3 1148 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 BTN2A2Q8WVV5 523 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 KCNE4Q8WWG9 221 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 TSACCQ96A04 125 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CELF6Q96J87 481 aaKnown RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 SLC46A1Q96NT5 459 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 PEBP4Q96S96 227 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CCDC3Q9BQI4 270 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CNPY3Q9BT09 278 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 TLR10Q9BXR5 811 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 TRIM7Q9C029 511 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 EVA1BQ9NVM1 165 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 NCKIPSDQ9NZQ3 722 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CTTNBP2NLQ9P2B4 639 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 UBA2Q9UBT2 640 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
SHMT2-215ENST00000554656 SNX12Q9UMY4 172 aa10.65□□□□□ -0.7
SHMT2-215ENST00000554656 PIEZO2Q9H5I5 2752 aa10.65□□□□□ -0.71
SHMT2-215ENST00000554656 FLNBO75369 2602 aaKnown RBP10.64□□□□□ -0.71
SHMT2-215ENST00000554656 MIF4GDA9UHW6 222 aaKnown RBP10.64□□□□□ -0.71
SHMT2-215ENST00000554656 CTIFO43310 598 aaKnown RBP10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PRAMEF11O60813 436 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 ANXA6P08133 673 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 GM2AP17900 193 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 HK3P52790 923 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 TMPRSS3P57727 454 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PPARDQ03181 441 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 RAD51Q06609 339 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 CKAP4Q07065 602 aaKnown RBP10.64□□□□□ -0.71
SHMT2-215ENST00000554656 C19orf57Q0VDD7 668 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 RALGDSQ12967 914 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PTK2BQ14289 1009 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 NFATC4Q14934 902 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 LRRC14Q15048 493 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 UGP2Q16851 508 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 ARHGAP40Q5TG30 622 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 CAMK1DQ8IU85 385 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 HID1Q8IV36 788 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 SFTPA2Q8IWL1 248 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 ARHGAP12Q8IWW6 846 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 TP53INP2Q8IXH6 220 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 LSMEM2Q8N112 164 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 NPWQ8N729 165 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PLA2G15Q8NCC3 412 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 LSM14AQ8ND56 463 aaKnown RBP10.64□□□□□ -0.71
SHMT2-215ENST00000554656 ZNF564Q8TBZ8 553 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-215ENST00000554656 PDXPQ96GD0 296 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 C1QTNF7Q9BXJ2 289 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 SLC13A1Q9BZW2 595 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 SEMA4CQ9C0C4 833 aa10.64□□□□□ -0.71
SHMT2-215ENST00000554656 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms