RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CDAP32320 146 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 TSPAN7P41732 249 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 DSCR9P59020 149 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 BNC1Q01954 994 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 DDX10Q13206 875 aaKnown RBP5.15□□□□□ -1.59
SCFD1-211ENST00000554437 COL28A1Q2UY09 1125 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 ZNF585BQ52M93 769 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 B3GNT6Q6ZMB0 384 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 LINGO2Q7L985 606 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 GSTA5Q7RTV2 222 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 CLEC18CQ8NCF0 446 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 AGBL3Q8NEM8 1001 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 HUS1BQ8NHY5 278 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 UCMAQ8WVF2 138 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 NUDCD2Q8WVJ2 157 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 SNRNP27Q8WVK2 155 aaKnown RBP5.15□□□□□ -1.59
SCFD1-211ENST00000554437 WASF1Q92558 559 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 SMARCE1Q969G3 411 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 C7orf26Q96N11 449 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 TM6SF1Q9BZW5 370 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 KIF9Q9HAQ2 790 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 SLC6A13Q9NSD5 602 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 HAO1Q9UJM8 370 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 RCOR1Q9UKL0 485 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 INTS6Q9UL03 887 aaKnown RBP5.15□□□□□ -1.59
SCFD1-211ENST00000554437 MKLN1Q9UL63 735 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 RABGAP1Q9Y3P9 1069 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 CAPN7Q9Y6W3 813 aa5.15□□□□□ -1.59
SCFD1-211ENST00000554437 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 hDV102S1A0JD36 115 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 TMEM202A6NGA9 273 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 TGFB1I1O43294 461 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 HOXB5P09067 269 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 HSPA1AP0DMV8 641 aaKnown RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 HSPA1BP0DMV9 641 aaKnown RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 PLA2G2AP14555 144 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 HNRNPH1P31943 449 aaKnown RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 ICAM3P32942 547 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 RGS2P41220 211 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 RPL7AP62424 266 aaKnown RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 DDR1Q08345 913 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 FGFBP1Q14512 234 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 TBCEQ15813 527 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 C2orf68Q2NKX9 166 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 MTSS1LQ765P7 747 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 MEPCEQ7L2J0 689 aaKnown RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 CNPY4Q8N129 248 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 TDRD7Q8NHU6 1098 aaKnown RBP5.14□□□□□ -1.59
SCFD1-211ENST00000554437 ETNPPLQ8TBG4 499 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 SLITRK1Q96PX8 696 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 GPR108Q9NPR9 543 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 ASAH2Q9NR71 780 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 SMC4Q9NTJ3 1288 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 POLG2Q9UHN1 485 aa5.14□□□□□ -1.59
SCFD1-211ENST00000554437 A0A0U1RQJ8 604 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 TMEM63AO94886 807 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 ZNF12P17014 697 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 TNFAIP3P21580 790 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 STX2P32856 288 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 PDLIM4P50479 330 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 OLR1P78380 273 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 TMEM115Q12893 351 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-211ENST00000554437 NAE1Q13564 534 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 DRAP1Q14919 205 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-211ENST00000554437 EFNB3Q15768 340 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 CCNG2Q16589 344 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 ALG11Q2TAA5 492 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 XKR9Q5GH70 373 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 HIST2H2BCQ6DN03 193 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 HIST2H2BDQ6DRA6 164 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 FAAH2Q6GMR7 532 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 KIAA1161Q6NSJ0 714 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 ANKRD54Q6NXT1 300 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 TSSK4Q6SA08 328 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 CREB3L2Q70SY1 520 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 RSRC2Q7L4I2 434 aaKnown RBP5.13□□□□□ -1.59
SCFD1-211ENST00000554437 MAATS1Q7Z4T9 603 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 HAPLN4Q86UW8 402 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 PSPC1Q8WXF1 523 aaKnown RBP5.13□□□□□ -1.59
SCFD1-211ENST00000554437 MTBPQ96DY7 904 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 FIZ1Q96SL8 496 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 MEIS3Q99687 375 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 NDST4Q9H3R1 872 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 MKKSQ9NPJ1 570 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-211ENST00000554437 SELENONQ9NZV5 590 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 ORC3Q9UBD5 711 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-211ENST00000554437 SLC9A2Q9UBY0 812 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 AASSQ9UDR5 926 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 ERVK-11Q9UQG0 969 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 SNX9Q9Y5X1 595 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 CEPT1Q9Y6K0 416 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 STON1Q9Y6Q2 735 aa5.13□□□□□ -1.59
SCFD1-211ENST00000554437 CLEC3BP05452 202 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 G6PDP11413 515 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 KRT10P13645 584 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 SSTR2P30874 369 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 EIF2S3P41091 472 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 PIP4K2AP48426 406 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 COMPP49747 757 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 PEX5P50542 639 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms