RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 MGME1Q9BQP7 344 aa11.93□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PACSIN1Q9BY11 444 aa11.93□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
TRAPPC6B-204ENST00000554018 KLQ9UEF7 1012 aa11.93□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PADI4Q9UM07 663 aa11.93□□□□□ -0.5
TRAPPC6B-204ENST00000554018 DOLKQ9UPQ8 538 aa11.93□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CACNB4O00305 520 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 MFSD11O43934 449 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SOCS5O75159 536 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CPP00450 1065 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TNFP01375 233 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ALPIP09923 528 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 HNRNPH3P31942 346 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SERPINB6P35237 376 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ACTN2P35609 894 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 MMP13P45452 471 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TAS2R40P59535 323 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 KIAA1024LP59773 190 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 GABREP78334 506 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 DPYSL3Q14195 570 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PTPRRQ15256 657 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CNGA3Q16281 694 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 HADHQ16836 314 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ISXQ2M1V0 245 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TBC1D25Q3MII6 688 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 MARC1Q5VT66 337 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 DENND2CQ68D51 928 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ESRP1Q6NXG1 681 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RBM44Q6ZP01 1051 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 BBS5Q8N3I7 341 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 KYQ8NBH2 561 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ATL2Q8NHH9 583 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SNIP1Q8TAD8 396 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 NSMCE1Q8WV22 266 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SCG3Q8WXD2 468 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SPOCK2Q92563 424 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 COQ10AQ96MF6 247 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LGR4Q9BXB1 951 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 FGF22Q9HCT0 170 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 NT5MQ9NPB1 228 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 MRPL40Q9NQ50 206 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CTTNBP2NLQ9P2B4 639 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RCOR3Q9P2K3 495 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 GPR34Q9UPC5 381 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SCN8AQ9UQD0 1980 aa11.92□□□□□ -0.5
TRAPPC6B-204ENST00000554018 A0A1W2PNU3 283 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PROSCO94903 275 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 HEXIM1O94992 359 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 MAP3K6O95382 1288 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TPM3P06753 285 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 HOXC4P09017 264 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CTPS1P17812 591 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PTMSP20962 102 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 VIPR1P32241 457 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TRIM23P36406 574 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ABCG1P45844 678 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LSSP48449 732 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SOWAHCQ53LP3 525 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ANKRD20A8PQ5CZ79 823 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PNCKQ6P2M8 343 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LVRNQ6Q4G3 990 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LRRC69Q6ZNQ3 347 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 HSD11B1LQ7Z5J1 315 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 GKN2Q86XP6 184 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TEX26Q8N6G2 289 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ARL10Q8N8L6 244 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 KCTD6Q8NC69 237 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 OR56A4Q8NGH8 313 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LRRN4Q8WUT4 740 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 NAT6Q93015 286 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 NUS1Q96E22 293 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ATXN7L3BQ96GX2 97 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SMIM14Q96QK8 99 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RBM15Q96T37 977 aaKnown RBP eCLIP11.91□□□□□ -0.53e-6■■□□□ 11.9
TRAPPC6B-204ENST00000554018 SEMA3CQ99985 751 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CCDC3Q9BQI4 270 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 SYNDIG1Q9H7V2 258 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 UVRAGQ9P2Y5 699 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 RAI2Q9Y5P3 530 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 DGKBQ9Y6T7 804 aa11.91□□□□□ -0.5
TRAPPC6B-204ENST00000554018 A0A0U1RQS6 177 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 A0A1W2PQ67 120 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PMS2P1A4D2B8 440 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 NPIPB15A6NHN6 443 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 PGLSO95336 258 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 H2AFZP0C0S5 128 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 CYP2A6P11509 494 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 LHCGRP22888 699 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ETV3P41162 512 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 GARSP41250 739 aaKnown RBP11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 ITKQ08881 620 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 GALNT2Q10471 571 aa11.9□□□□□ -0.5
TRAPPC6B-204ENST00000554018 IHHQ14623 411 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms