RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 STEAP4Q687X5 459 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 DENND2CQ68D51 928 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 KIAA1324Q6UXG2 1013 aaKnown RBP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 ZSWIM9Q86XI8 627 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 CAMKK1Q8N5S9 505 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 GSDMBQ8TAX9 411 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 FAM131CQ96AQ9 280 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 VOPP1Q96AW1 172 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 ARRDC3Q96B67 414 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 ZNF669Q96BR6 464 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 PKNOX2Q96KN3 472 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 MRGPRX1Q96LB2 322 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 NECAB3Q96P71 396 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 KDM4CQ9H3R0 1056 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 PPCSQ9HAB8 311 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 PCDH12Q9NPG4 1184 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 PIH1D1Q9NWS0 290 aaKnown RBP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 PKD2L2Q9NZM6 624 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 B4GALT6Q9UBX8 382 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 SARDHQ9UL12 918 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 RPS6KL1Q9Y6S9 549 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 LRRK1Q38SD2 2015 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 RGSL1A5PLK6 1076 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 MROH6A6NGR9 719 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 NPIPB15A6NHN6 443 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 STX7O15400 261 aaKnown RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TSPAN6O43657 245 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 ZNF217O75362 1048 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 RNASEH2AO75792 299 aaKnown RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 IVLP07476 585 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 FAM153BP0C7A2 387 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 ELFN1P0C7U0 828 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TIMP2P16035 220 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TPH1P17752 444 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 CTPS1P17812 591 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 NDUFV2P19404 249 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 AOC1P19801 751 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 DRD3P35462 400 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 HMGCLP35914 325 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 P2RY2P41231 377 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 ZNF140P52738 457 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 PTPN5P54829 565 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 FAM193AP78312 1265 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 PRAMEP78395 509 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 ILF2Q12905 390 aaKnown RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 NAB1Q13506 487 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 CRYMQ14894 314 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 FAM153CQ494X1 144 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 KIAA0930Q6ICG6 404 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TMEM92Q6UXU6 159 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TMEM135Q86UB9 458 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 ANKMY2Q8IV38 441 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 LMNTD2Q8IXW0 634 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 HDDC3Q8N4P3 179 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 CALML6Q8TD86 181 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 CXorf40AQ8TE69 158 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 GANCQ8TET4 914 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 UBLCP1Q8WVY7 318 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 CDKL2Q92772 493 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 CFAP36Q96G28 342 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 PWWP2AQ96N64 755 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TXLNGYQ9BZA5 131 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 MKRN2Q9H000 416 aaKnown RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 VPS37BQ9H9H4 285 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 PREBQ9HCU5 417 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 FBXL12Q9NXK8 326 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 NINJ2Q9NZG7 142 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 NFKBIL1Q9UBC1 381 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 MTF2Q9Y483 593 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-210ENST00000553950 TECTAO75443 2155 aa14.53□□□□□ -0.08
SHMT2-210ENST00000553950 A0A087WUV0 522 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 TMEM221A6NGB7 291 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 M0R296 226 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 AREL1O15033 823 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 RIPK2O43353 540 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 LDB2O43679 373 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 RPP40O75818 363 aaKnown RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 ALPIP09923 528 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 GABRG2P18507 467 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 OXTRP30559 389 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 HNF1BP35680 557 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 ABL2P42684 1182 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 CLCN5P51795 746 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 DCDC1P59894 354 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 CRADDP78560 199 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 ACVR1Q04771 509 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 CNTN1Q12860 1018 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 MSLNQ13421 630 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 FZD5Q13467 585 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 MTM1Q13496 603 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 FASTKD3Q14CZ7 662 aaKnown RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 LONRF1Q17RB8 773 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 KLHL38Q2WGJ6 581 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 POM121L1PQ3SYA9 428 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 PIP5KL1Q5T9C9 394 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 AGBL4Q5VU57 503 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 LRRC66Q68CR7 880 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms