RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 TRIM23P36406 574 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 TLE3Q04726 772 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 ACOX1Q15067 660 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 NFKBIBQ15653 356 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 IGF2-ASQ6U949 168 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 SPACA3Q8IXA5 215 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 PDCD6IPQ8WUM4 868 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 NSMCE1Q8WV22 266 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 PDXPQ96GD0 296 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 BBC3Q96PG8 261 aaPredicted RBP17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 LGMNQ99538 433 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 NOD2Q9HC29 1040 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 ASCL3Q9NQ33 180 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 THSD1Q9NS62 852 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 RCOR3Q9P2K3 495 aaPredicted RBP17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 B4GALT6Q9UBX8 382 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 GPR34Q9UPC5 381 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 TMEM202A6NGA9 273 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 MYO1FO00160 1098 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 TNFRSF10CO14798 259 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 CPP00450 1065 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 NFKBIAP25963 317 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 CDH6P55285 790 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 SPIDRQ14159 915 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 KRT81Q14533 505 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 C3orf38Q5JPI3 329 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 RALGPS1Q5JS13 557 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 MARC1Q5VT66 337 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 KCTD16Q68DU8 428 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 PNCKQ6P2M8 343 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 ALKBH5Q6P6C2 394 aaKnown RBP17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 LRRC49Q8IUZ0 686 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 OR1E3Q8WZA6 343 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 COQ10AQ96MF6 247 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 FCRL3Q96P31 734 aaPredicted RBP17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 UBL7Q96S82 380 aaPredicted RBP17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 WDR26Q9H7D7 661 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 FGF22Q9HCT0 170 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 PCDHGA8Q9Y5G5 932 aa17.59■□□□□ 0.41
SDR39U1-206ENST00000553930 A0A1W2PNU3 283 aaPredicted RBP17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 NTN3O00634 580 aaPredicted RBP17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 GYPCP04921 128 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 IL4RP24394 825 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 VIPR1P32241 457 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 MMP13P45452 471 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 MAXP61244 160 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 HADHQ16836 314 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 CCDC122Q5T0U0 273 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 OR6C4Q8NGE1 309 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 FAM71BQ8TC56 605 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 CCDC74AQ96AQ1 378 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 NUS1Q96E22 293 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 SLC46A1Q96NT5 459 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 SYNDIG1Q9H7V2 258 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 MRPL40Q9NQ50 206 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 KCTD5Q9NXV2 234 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 PHTF1Q9UMS5 762 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 KALRNO60229 2985 aa17.58■□□□□ 0.4
SDR39U1-206ENST00000553930 PDE2AO00408 941 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 HEXIM1O94992 359 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 CYP2A6P11509 494 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 RBMS1P29558 406 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 SSR1P43307 286 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 PDX1P52945 283 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 TRAF2Q12933 501 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 MMRN1Q13201 1228 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 CNGA3Q16281 694 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 TAF8Q7Z7C8 310 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 PELI3Q8N2H9 469 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 GPR156Q8NFN8 814 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 ZNF564Q8TBZ8 553 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 NAF1Q96HR8 494 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 LGR4Q9BXB1 951 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 IFNKQ9P0W0 207 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 RABGEF1Q9UJ41 708 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 LRRK1Q38SD2 2015 aa17.57■□□□□ 0.4
SDR39U1-206ENST00000553930 COL27A1Q8IZC6 1860 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 ASXL3Q9C0F0 2248 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 MGAQ8IWI9 3026 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 EIF4E1BA6NMX2 242 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 PGLSO95336 258 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 CD48P09326 243 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 MYCLP1P12525 358 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 ARSEP51690 589 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 ARMC12Q5T9G4 340 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 DENND2CQ68D51 928 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 OGFOD3Q6PK18 319 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 GPR155Q7Z3F1 870 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 CBARPQ8N350 705 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 TEX26Q8N6G2 289 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 FAM46DQ8NEK8 389 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 WDR36Q8NI36 951 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 KCNE4Q8WWG9 221 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 PRR11Q96HE9 360 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 TMEM168Q9H0V1 697 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 CYP4F12Q9HCS2 524 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 NENFQ9UMX5 172 aa17.56■□□□□ 0.4
SDR39U1-206ENST00000553930 ATMQ13315 3056 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms