RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PABPC3Q9H361 631 aaKnown RBP14.59□□□□□ -0.07
SHMT2-208ENST00000553868 SLC25A13Q9UJS0 675 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 NYNRINQ9P2P1 1898 aaKnown RBP14.59□□□□□ -0.07
SHMT2-208ENST00000553868 COL5A1P20908 1838 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-208ENST00000553868 F5H423 210 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-208ENST00000553868 ALOX15BO15296 676 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 TLX3O43711 291 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-208ENST00000553868 SNAP91O60641 907 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 KLF8O95600 359 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-208ENST00000553868 CA4P22748 312 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 GLDCP23378 1020 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 HLA-FP30511 346 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 CD70P32970 193 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 OPRD1P41143 372 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 DGKGP49619 791 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 ARF5P84085 180 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 MESP2Q0VG99 397 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 GPS2Q13227 327 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 CCDC38Q502W7 563 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 EMC10Q5UCC4 262 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 KCTD11Q693B1 232 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 ALG1LQ6GMV1 187 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 LEKR1Q6ZMV7 388 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 APCDD1Q8J025 514 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 PYROXD1Q8WU10 500 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 LMLNQ96KR4 655 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 FSD1LQ9BXM9 530 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 SEMA4CQ9C0C4 833 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 IL21RQ9HBE5 538 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 DNAJC17Q9NVM6 304 aaKnown RBP14.58□□□□□ -0.08
SHMT2-208ENST00000553868 FBXO10Q9UK96 956 aa14.58□□□□□ -0.08
SHMT2-208ENST00000553868 TCRBV21S2A2A0A5A6 115 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 PLK4O00444 970 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 MAP2K7O14733 419 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 SPAG6O75602 509 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 TMCC1O94876 653 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 TTC4O95801 387 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 CPP00450 1065 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 ASLP04424 464 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 POLR2EP19388 210 aaKnown RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 PHBP35232 272 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 TIE1P35590 1138 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 HSD17B3P37058 310 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 NPY2RP49146 381 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 SERPINH1P50454 418 aaKnown RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 EIF3BP55884 814 aaKnown RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 RHOAP61586 193 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 NSUN2Q08J23 767 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 CYTH1Q15438 398 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 CCDC157Q569K6 752 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 FNBP1LQ5T0N5 605 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 SYCP2LQ5T4T6 812 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 ARMC3Q5W041 872 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 MTERF4Q7Z6M4 381 aaKnown RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 KIAA0907Q7Z7F0 614 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 CCNJLQ8IV13 435 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 DNAAF3Q8N9W5 541 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 IPMKQ8NFU5 416 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 OXNAD1Q96HP4 312 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 PWWP2AQ96N64 755 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 SEMA3CQ99985 751 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 TBL1YQ9BQ87 522 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 NAT9Q9BTE0 207 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 MLPHQ9BV36 600 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 CDC42EP4Q9H3Q1 356 aaKnown RBP14.57□□□□□ -0.08
SHMT2-208ENST00000553868 ZNF446Q9NWS9 450 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 BFARQ9NZS9 450 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 DEC1Q9P2X7 70 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 CLEC4EQ9ULY5 219 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 SLC27A6Q9Y2P4 619 aa14.57□□□□□ -0.08
SHMT2-208ENST00000553868 SDR42E2A6NKP2 422 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 RIPK2O43353 540 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 PMPCBO75439 489 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 DKK1O94907 266 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 ATP5BP06576 529 aaKnown RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 GSTA2P09210 222 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CHRM1P11229 460 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 NNMTP40261 264 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CD86P42081 329 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 MAGEA3P43357 314 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 WNT3AP56704 352 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 MAXP61244 160 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 DSC2Q02487 901 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CDH17Q12864 832 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 GRIK2Q13002 908 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 E2F5Q15329 346 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 FUT11Q495W5 492 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 GRAMD4Q6IC98 578 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 LRIG3Q6UXM1 1119 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 LINGO4Q6UY18 593 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 GPR155Q7Z3F1 870 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CROCCP2Q86T23 111 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CAND1Q86VP6 1230 aaKnown RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 PALM2Q8IXS6 379 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 PGBD5Q8N414 524 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 NAT16Q8N8M0 369 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms