RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TM7SF2O76062 418 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 MAP3K6O95382 1288 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 CPP00450 1065 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 CYP2A6P11509 494 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-209ENST00000553855 CCNB1P14635 433 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 TGM2P21980 687 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 ARRB1P49407 418 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-209ENST00000553855 PPP2CBP62714 309 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 PPP2CAP67775 309 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 FAM193AP78312 1265 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 GBE1Q04446 702 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 SLC10A7Q0GE19 358 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 SLC14A1Q13336 389 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 UGP2Q16851 508 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 HS1BP3Q53T59 392 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 ARMC12Q5T9G4 340 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 SLC9A4Q6AI14 798 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC70Q6NSX1 233 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 MFSD7Q6UXD7 560 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 IQCHQ86VS3 1027 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 DCP2Q8IU60 420 aaKnown RBP8.4□□□□□ -1.06
PSEN1-209ENST00000553855 CAMK1DQ8IU85 385 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 GALNT12Q8IXK2 581 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 MFSD2AQ8NA29 543 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 KLK6Q92876 244 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 FATE1Q969F0 183 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 HAUS1Q96CS2 278 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 HDAC11Q96DB2 347 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 RMDN1Q96DB5 314 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 TSGA13Q96PP4 275 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 SLC17A9Q9BYT1 436 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 NPHS2Q9NP85 383 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 DTLQ9NZJ0 730 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 SEPT10Q9P0V9 454 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 GUCA1BQ9UMX6 200 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 TFR2Q9UP52 801 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 PCDHA3Q9Y5H8 950 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 PTPRZ1P23471 2315 aaPredicted RBP8.4□□□□□ -1.07
PSEN1-209ENST00000553855 DOCK4Q8N1I0 1966 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 A6NNZ2 444 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TTLL8A6PVC2 850 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 HACD1B0YJ81 288 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TLR4O00206 839 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 STK10O94804 968 aaKnown RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TJP3O95049 919 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PAK4O96013 591 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PRLRP16471 622 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 CTNNA1P35221 906 aaKnown RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 CDKN2BP42772 138 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 CCT8P50990 548 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TAS2R38P59533 333 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 MAXP61244 160 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PPIDQ08752 370 aaKnown RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 ARHGEF7Q14155 803 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PPP2R5EQ16537 467 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 KIF19Q2TAC6 998 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 ZNF284Q2VY69 593 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 HLA-BQ31612 363 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 USP45Q70EL2 814 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PTAR1Q7Z6K3 402 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TMEM139Q8IV31 216 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 LRRC8AQ8IWT6 810 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TP53INP2Q8IXH6 220 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PQLC3Q8N755 202 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PLD5Q8N7P1 536 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 DENND6BQ8NEG7 585 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 SETD7Q8WTS6 366 aaKnown RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 TFB1MQ8WVM0 346 aaKnown RBP8.39□□□□□ -1.07
PSEN1-209ENST00000553855 ASB12Q8WXK4 309 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 MAML1Q92585 1016 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 LRRC45Q96CN5 670 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 MYOCQ99972 504 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 SEMA3CQ99985 751 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 MGME1Q9BQP7 344 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 LACRTQ9GZZ8 138 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 GOLPH3Q9H4A6 298 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 KCTD5Q9NXV2 234 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PHTF1Q9UMS5 762 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 SNX11Q9Y5W9 270 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 HS3ST3A1Q9Y663 406 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 DUSP10Q9Y6W6 482 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 FAM186AA6NE01 2351 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 PLXND1Q9Y4D7 1925 aa8.39□□□□□ -1.07
PSEN1-209ENST00000553855 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 GPR179Q6PRD1 2367 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 hCG_1818297A0A087WSY0 165 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 TSPAN11A1L157 253 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 IGLON5A6NGN9 336 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 H7C0C1 242 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 TOR1BO14657 336 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms