RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CLTBP09497 229 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 KLF9Q13886 244 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-210ENST00000553455 BECN1Q14457 450 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SOWAHCQ53LP3 525 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-210ENST00000553455 PLEKHA7Q6IQ23 1121 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 ANKRD54Q6NXT1 300 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SEPT14Q6ZU15 432 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 TICAM1Q8IUC6 712 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 DNAJC10Q8IXB1 793 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 CCDC13Q8IYE1 715 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 ARRDC2Q8TBH0 407 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 APOLD1Q96LR9 279 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 TMEM68Q96MH6 324 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 CRAMP1Q96RY5 1269 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 TMEM47Q9BQJ4 181 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SPRTNQ9H040 489 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SLITRK6Q9H5Y7 841 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 ESRP2Q9H6T0 727 aaKnown RBP5.31□□□□□ -1.56
SYNE2-210ENST00000553455 CLK4Q9HAZ1 481 aaKnown RBP5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SETD4Q9NVD3 440 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 NKIRAS2Q9NYR9 191 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SUCLA2Q9P2R7 463 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-210ENST00000553455 FBXL17Q9UF56 701 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 TMEM5Q9Y2B1 443 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 HS3ST3B1Q9Y662 390 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 ZC3H11AO75152 810 aaKnown RBP eCLIP5.3□□□□□ -1.56
SYNE2-210ENST00000553455 BEST1O76090 585 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 FTCDO95954 541 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 ADRB2P07550 413 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 GCH1P30793 250 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 MMP13P45452 471 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 SORDQ00796 357 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 STK4Q13043 487 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 TRAF1Q13077 416 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 ITGADQ13349 1161 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 NAE1Q13564 534 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 KRT24Q2M2I5 525 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 WASHC2DQ5SRD0 308 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 DCAF12L2Q5VW00 463 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 PMS2CLQ68D20 193 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 CFAP77Q6ZQR2 320 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 Q6ZSV7 163 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 MTSS1LQ765P7 747 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 TRAPPC11Q7Z392 1133 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 CTU1Q7Z7A3 348 aaKnown RBP5.3□□□□□ -1.56
SYNE2-210ENST00000553455 WDR63Q8IWG1 891 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 NANOGP1Q8N7R0 232 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 SGCDQ92629 289 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 IGSF8Q969P0 613 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 ELMOD3Q96FG2 381 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 FEM1CQ96JP0 617 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 GFM1Q96RP9 751 aaKnown RBP5.3□□□□□ -1.56
SYNE2-210ENST00000553455 SRSF8Q9BRL6 282 aaKnown RBP5.3□□□□□ -1.56
SYNE2-210ENST00000553455 MAK16Q9BXY0 300 aaKnown RBP5.3□□□□□ -1.56
SYNE2-210ENST00000553455 ISCUQ9H1K1 167 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 MKKSQ9NPJ1 570 aaPredicted RBP5.3□□□□□ -1.56
SYNE2-210ENST00000553455 RPS6KA6Q9UK32 745 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 STON1Q9Y6Q2 735 aa5.3□□□□□ -1.56
SYNE2-210ENST00000553455 PASKQ96RG2 1323 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 TMEM202A6NGA9 273 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 ERAL1O75616 437 aaKnown RBP5.29□□□□□ -1.56
SYNE2-210ENST00000553455 NDUFB4O95168 129 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 TUBBP07437 444 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 FBLP22087 321 aaKnown RBP5.29□□□□□ -1.56
SYNE2-210ENST00000553455 ME1P48163 572 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 RFX5P48382 616 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-210ENST00000553455 GALCP54803 685 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 IFI35P80217 286 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-210ENST00000553455 ADORA2A-AS1P86434 159 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 MYBPC2Q14324 1141 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 MMEL1Q495T6 779 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 COLEC12Q5KU26 742 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 CFAP58Q5T655 872 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 C7orf57Q8NEG2 295 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 OR14L1PQ8NHC6 308 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 LPAR1Q92633 364 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 OTULINQ96BN8 352 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 URB1-AS1Q96HZ7 61 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 OR2A14Q96R47 310 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 MAU2Q9Y6X3 613 aa5.29□□□□□ -1.56
SYNE2-210ENST00000553455 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 H0YGN5 161 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 J3KR12 359 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ENTPD3O75355 529 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 LCATP04180 440 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 CYC1P08574 325 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 NR2F1P10589 423 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ARSBP15848 533 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 HOXA13P31271 388 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-210ENST00000553455 PIGAP37287 484 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 CAMPP49913 170 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 PMS2P54278 862 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 C21orf58P58505 322 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ZP1P60852 638 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ST3GAL1Q11201 340 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 PTGR1Q14914 329 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 RABEP1Q15276 862 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ADIPOQQ15848 244 aa5.28□□□□□ -1.56
SYNE2-210ENST00000553455 ETFDHQ16134 617 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms