RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RAD51BO15315 384 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 YKT6O15498 198 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 KCNN4O15554 427 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 KIF5CO60282 957 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 DFNA5O60443 496 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 OPHN1O60890 802 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 HEXIM1O94992 359 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 PAK4O96013 591 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 LHCGRP22888 699 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 IGFALSP35858 605 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 RABIFP47224 123 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 IRF4Q15306 451 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 HLA-BQ31612 363 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 DARS2Q6PI48 645 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 PTAR1Q7Z6K3 402 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 OXR1Q8N573 874 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 TP53I13Q8NBR0 393 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 LPCAT1Q8NF37 534 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 CENPTQ96BT3 561 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 SPATA13Q96N96 652 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 PPP1R2P1Q96PQ5 205 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 FCRL5Q96RD9 977 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 LYSMD1Q96S90 227 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 RTKNQ9BST9 563 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 GAREM1Q9H706 876 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 ERVMER34-1Q9H9K5 563 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 GDF3Q9NR23 364 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 KCTD5Q9NXV2 234 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 DLL3Q9NYJ7 618 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 RSPH14Q9UHP6 348 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 CHKBQ9Y259 395 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 CA5BQ9Y2D0 317 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 FNDC3AQ9Y2H6 1198 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 ZKSCAN5Q9Y2L8 839 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 COQ6Q9Y2Z9 468 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 SNX11Q9Y5W9 270 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 LIASO43766 372 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 LZTS3O60299 673 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 MT-CYBP00156 380 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 ALPIP09923 528 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 THEGLP0DJG4 465 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 GM2AP17900 193 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 CCT8P50990 548 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 CLDN2P57739 230 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 PFN3P60673 137 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 SLC14A1Q13336 389 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 MPP3Q13368 585 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 ARHGEF7Q14155 803 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 LRRC14Q15048 493 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 LRRC66Q68CR7 880 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 KDELC1Q6UW63 502 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 PID1Q7Z2X4 250 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 DCP2Q8IU60 420 aaKnown RBP11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 SLC22A18ASQ8N1D0 253 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 OR13H1Q8NG92 308 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 OR2I1PQ8NGU4 316 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 SPATA22Q8NHS9 363 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 MAIP1Q8WWC4 291 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 ATG4AQ8WYN0 398 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 RMDN1Q96DB5 314 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 RTP4Q96DX8 246 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 NUS1Q96E22 293 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 IFT43Q96FT9 208 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 KLHDC7BQ96G42 594 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 COQ10AQ96MF6 247 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 C10orf88Q9H8K7 445 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 USP29Q9HBJ7 922 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 TRMT1Q9NXH9 659 aaKnown RBP11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 PYCARDQ9ULZ3 195 aa11.74□□□□□ -0.53
TRAFD1-209ENST00000552896 POM121BA6NF01 834 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 C5orf60A6NFR6 353 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 USP27XA6NNY8 438 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ENC1O14682 589 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 PMPCBO75439 489 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ANXA9O76027 345 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 RECQL5O94762 991 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 NDST3O95803 873 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 FGGP02679 453 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 CTPS1P17812 591 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 HNF1BP35680 557 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 TNNT3P45378 269 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ARRB1P49407 418 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 GEMP55040 296 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 YPEL5P62699 121 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 SEMG2Q02383 582 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 CDK18Q07002 472 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 MTM1Q13496 603 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 GALNT3Q14435 633 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ACOX1Q15067 660 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 SIX1Q15475 284 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 OASLQ15646 514 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 PCSK7Q16549 785 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 QPCTQ16769 361 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 WSCD2Q2TBF2 565 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF569Q5MCW4 686 aa11.73□□□□□ -0.53
TRAFD1-209ENST00000552896 ANKRD20A2Q5SQ80 823 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms