RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ZNF549Q6P9A3 640 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 PIWIL4Q7Z3Z4 852 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 SDCCAG8Q86SQ7 713 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ITIH5Q86UX2 942 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CARNMT1Q8N4J0 409 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ARL14EPQ8N8R7 260 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 OR52B2Q96RD2 323 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 POMKQ9H5K3 350 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 EBF2Q9HAK2 575 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TCF7L2Q9NQB0 619 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 NOP53Q9NZM5 478 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 NCKIPSDQ9NZQ3 722 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 RAI2Q9Y5P3 530 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ANKRD36A6QL64 1941 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 NEMP2A6NFY4 417 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 H0Y626 953 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 GFRA2O00451 464 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 SNAP91O60641 907 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 EFCAB14O75071 495 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 TMCC1O94876 653 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 ANP32DO95626 131 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 OLFM2O95897 454 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 TIMP1P01033 207 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 PDHA1P08559 390 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 FDXRP22570 491 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 MZF1P28698 734 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 MXRA7P84157 204 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 TXNDC8Q6A555 127 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 Q6ZNB5 142 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 GPR65Q8IYL9 337 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 ENDOVQ8N8Q3 282 aaKnown RBP14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 HJURPQ8NCD3 748 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 MDGA1Q8NFP4 955 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 CMTM5Q96DZ9 223 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 CNDP1Q96KN2 507 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 PCDHGC4Q9Y5F7 938 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 KIAA1671Q9BY89 1806 aa14.04□□□□□ -0.16
RAB3IP-216ENST00000552199 A8MT66 165 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 E9PBE3 544 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SCAMP3O14828 347 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 ZBTB14O43829 449 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 KLHL41O60662 606 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TM7SF2O76062 418 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SLC4A1P02730 911 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 HDCP19113 662 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 PRDX6P30041 224 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 PPM1AP35813 382 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 CPOXP36551 454 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 STC1P52823 247 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 ZXDBP98169 803 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TIAL1Q01085 375 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 NAA25Q14CX7 972 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 LRRC26Q2I0M4 334 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TYSND1Q2T9J0 566 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 GPR158Q5T848 1215 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 LINGO4Q6UY18 593 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 GLT6D1Q7Z4J2 308 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 PIM3Q86V86 326 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 PHTF2Q8N3S3 785 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 POU5F2Q8N7G0 328 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 KDM1BQ8NB78 822 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 LPCAT1Q8NF37 534 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 OR4K2Q8NGD2 314 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TMA16Q96EY4 203 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 FEM1AQ9BSK4 669 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SHCBP1LQ9BZQ2 653 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 WDR55Q9H6Y2 383 aaPredicted RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 INTS10Q9NVR2 710 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 ASB3Q9Y575 518 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 OR51B4Q9Y5P0 310 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 CPQQ9Y646 472 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 GOLGA8QA0A0J9YX86 632 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 GOLGA8OA6NCC3 632 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TRIM43BA6NCK2 446 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 C2orf81A6NN90 581 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 GOLGA8NF8WBI6 632 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 DCXO43602 365 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 IPO13O94829 963 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 LUC7L3O95232 432 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TPBGLP0DKB5 382 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 KCNA5P22460 613 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 PMLP29590 882 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SUOXP51687 545 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 COPAP53621 1224 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 CREMQ03060 361 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 KPNB1Q14974 876 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 KHDC1Q4VXA5 237 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 INO80DQ53TQ3 878 aaPredicted RBP14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 NCEH1Q6PIU2 408 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SLC22A9Q8IVM8 553 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 SCUBE1Q8IWY4 988 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 FAM217AQ8IXS0 508 aa14.03□□□□□ -0.16
RAB3IP-216ENST00000552199 TRIM43Q96BQ3 446 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms