RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SHROOM3Q8TF72 1996 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 TLR4O00206 839 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 FZD6O60353 706 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 DFNA5O60443 496 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 MMP20O60882 483 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 STK10O94804 968 aaKnown RBP17.4■□□□□ 0.38
CDK4-208ENST00000551706 RBP3P10745 1247 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 CYP2A6P11509 494 aaPredicted RBP17.4■□□□□ 0.38
CDK4-208ENST00000551706 ITIH2P19823 946 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 MSNP26038 577 aaKnown RBP17.4■□□□□ 0.38
CDK4-208ENST00000551706 CD86P42081 329 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 LIG3P49916 1009 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 WASHC5Q12768 1159 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 FGL2Q14314 439 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 KIF19Q2TAC6 998 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 DPPA4Q7L190 304 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 IMP4Q96G21 291 aaKnown RBP17.4■□□□□ 0.38
CDK4-208ENST00000551706 ADGRE3Q9BY15 652 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 GLOD4Q9HC38 313 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 PCDH9Q9HC56 1237 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 GDF3Q9NR23 364 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 DNAAF2Q9NVR5 837 aaKnown RBP17.4■□□□□ 0.38
CDK4-208ENST00000551706 KLHL8Q9P2G9 620 aaPredicted RBP17.4■□□□□ 0.38
CDK4-208ENST00000551706 DNPEPQ9ULA0 475 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 PPIL1Q9Y3C6 166 aa17.4■□□□□ 0.38
CDK4-208ENST00000551706 A6NNZ2 444 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 KCNK3O14649 394 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 FPGTO14772 594 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 WNT9AO14904 365 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
CDK4-208ENST00000551706 OPHN1O60890 802 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 WNT1P04628 370 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 MMP2P08253 660 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 ELFN1P0C7U0 828 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 C6P13671 934 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 CTSKP43235 329 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 EPHB1P54762 984 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 SKOR1P84550 965 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 BNC1Q01954 994 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 RALGDSQ12967 914 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 AGERQ15109 404 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 ZNF423Q2M1K9 1284 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 DARS2Q6PI48 645 aaKnown RBP17.39■□□□□ 0.37
CDK4-208ENST00000551706 LAYNQ6UX15 382 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 RAB44Q7Z6P3 723 aaPredicted RBP17.39■□□□□ 0.37
CDK4-208ENST00000551706 ABI3BPQ7Z7G0 1075 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 REXO1L1PQ8IX06 675 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 SCRN2Q96FV2 425 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 KLHDC7BQ96G42 594 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 MCCC1Q96RQ3 725 aaPredicted RBP17.39■□□□□ 0.37
CDK4-208ENST00000551706 MYOCQ99972 504 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 FRMD8P1Q9BZ68 369 aaPredicted RBP17.39■□□□□ 0.37
CDK4-208ENST00000551706 FZD3Q9NPG1 666 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 KCTD5Q9NXV2 234 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 B4GALT6Q9UBX8 382 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 SNX11Q9Y5W9 270 aa17.39■□□□□ 0.37
CDK4-208ENST00000551706 CELSR3Q9NYQ7 3312 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 BPTFQ12830 3046 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 PRKCGP05129 697 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 PDHA1P08559 390 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 ZNF883P0CG24 379 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 RBL1P28749 1068 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 VIPR1P32241 457 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 NXPH1P58417 271 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 SLC14A1Q13336 389 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 HLA-BQ31612 363 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 LIPIQ6XZB0 460 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 KYAT3Q6YP21 454 aaKnown RBP17.38■□□□□ 0.37
CDK4-208ENST00000551706 PID1Q7Z2X4 250 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 DCP2Q8IU60 420 aaKnown RBP17.38■□□□□ 0.37
CDK4-208ENST00000551706 ZNF567Q8N184 647 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 OXR1Q8N573 874 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 HNRNPLLQ8WVV9 542 aaKnown RBP17.38■□□□□ 0.37
CDK4-208ENST00000551706 TADA1Q96BN2 335 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 RBM15Q96T37 977 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDK4-208ENST00000551706 KLF6Q99612 283 aaPredicted RBP17.38■□□□□ 0.37
CDK4-208ENST00000551706 TLR10Q9BXR5 811 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 CCDC86Q9H6F5 360 aaKnown RBP17.38■□□□□ 0.37
CDK4-208ENST00000551706 GAREM1Q9H706 876 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 ERVMER34-1Q9H9K5 563 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 CHKBQ9Y259 395 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 JRKLQ9Y4A0 524 aa17.38■□□□□ 0.37
CDK4-208ENST00000551706 PCDH15Q96QU1 1955 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 PSMD11O00231 422 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 TOR1BO14657 336 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 RAD51BO15315 384 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 KIF5CO60282 957 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 TRBC1P01850 177 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 THEGLP0DJG4 465 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 PI4KAP42356 2102 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 TNNT3P45378 269 aaPredicted RBP17.37■□□□□ 0.37
CDK4-208ENST00000551706 RABIFP47224 123 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 ARHGEF7Q14155 803 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 IHHQ14623 411 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 LRRC14Q15048 493 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 ITPRIPL1Q6GPH6 555 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 GCNT7Q6ZNI0 430 aa17.37■□□□□ 0.37
CDK4-208ENST00000551706 SLC13A5Q86YT5 568 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms