RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 WDR59Q6PJI9 974 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC81Q6ZN84 652 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 RFLNAQ6ZTI6 216 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 BTLAQ7Z6A9 289 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PTRH1Q86Y79 214 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 RCBTB1Q8NDN9 531 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 OR2AP1Q8NGE2 309 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 CXorf40AQ8TE69 158 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 HTR3CQ8WXA8 447 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PGAP3Q96FM1 320 aaPredicted RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PPP1R16AQ96I34 528 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 C1orf74Q96LT6 269 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 HAPLN3Q96S86 360 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC13A1Q9BZW2 595 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TRIM7Q9C029 511 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 ZCCHC2Q9C0B9 1178 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TMEM168Q9H0V1 697 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 FGF22Q9HCT0 170 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PCDH12Q9NPG4 1184 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 THSD1Q9NS62 852 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 SEPT11Q9NVA2 429 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TAS2R14Q9NYV8 317 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 SPASTQ9UBP0 616 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 LRRK2Q5S007 2527 aa6.9□□□□□ -1.31
PRPF40B-214ENST00000551320 CHD5Q8TDI0 1954 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 PRRC2CQ9Y520 2896 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CDC14CA4D256 554 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 C2CD4BA6NLJ0 364 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CDRT15L2A8MXV6 281 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TMCO5BA8MYB1 307 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 B8ZZF3 427 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 RASA4BC9J798 803 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 LMO7DNF2Z398 122 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 H3BM21 787 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TEX33O43247 280 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CCP110O43303 1012 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 RASA4O43374 803 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TSPAN6O43657 245 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 KDELR3O43731 214 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 AP1G1O43747 822 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 RAMP2O60895 175 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TM7SF2O76062 418 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 RASGRP1O95267 797 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 FGFR1OPO95684 399 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 POP4O95707 220 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 F9P00740 461 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 FUCA1P04066 466 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 GP1BAP07359 652 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CCL4P13236 92 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CTSEP14091 401 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 GM2AP17900 193 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 EPHB2P29323 1055 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 SDC4P31431 198 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 NUDT1P36639 197 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 PPP1R2P41236 205 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 POLD2P49005 469 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 LIG3P49916 1009 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 IDH3AP50213 366 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 DUSP3P51452 185 aaPredicted RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 OR1D5P58170 312 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 ERVPABLB-1P60509 514 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 SRP54P61011 504 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TYRO3Q06418 890 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 UBAP2LQ14157 1087 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CLCA4Q14CN2 919 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 PHF19Q5T6S3 580 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 ALKBH2Q6NS38 261 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 RAB11FIP2Q7L804 512 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF761Q86XN6 746 aaPredicted RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 ELOA2Q8IYF1 753 aaPredicted RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 FBXO39Q8N4B4 442 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 USP7Q93009 1102 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TBC1D31Q96DN5 1066 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 LENG8Q96PV6 779 aaPredicted RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 GFM1Q96RP9 751 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 PPP1R9BQ96SB3 815 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 APOOQ9BUR5 198 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 DUSP23Q9BVJ7 150 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 CEP44Q9C0F1 390 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TTYH3Q9C0H2 523 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TMEM248Q9NWD8 314 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 TMEM9Q9P0T7 183 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 ST14Q9Y5Y6 855 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 RNF215Q9Y6U7 377 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 DOPEY2Q9Y3R5 2298 aa6.89□□□□□ -1.31
PRPF40B-214ENST00000551320 SPENQ96T58 3664 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CCDC187A0A096LP49 1063 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 GTPBP10A4D1E9 387 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 D6RAR5 112 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 NTN3O00634 580 aaPredicted RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 PLD2O14939 933 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 B4GAT1O43505 415 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 GSRP00390 522 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CYP1A1P04798 512 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms