RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, human

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF41-208	ENST00000550379	FAM170B	A6NMN3	283 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TOR1B	O14657	336 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	DCX	O43602	365 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	RNF40	O75150	1001 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ZNF217	O75362	1048 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	KLF8	O95600	359 aa	Predicted RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CP	P00450	1065 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	UGT2B4	P06133	528 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	PYGL	P06737	847 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ADRB3	P13945	408 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	HOXB2	P14652	356 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	PAM	P19021	973 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ARNT	P27540	789 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	VIPR1	P32241	457 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	STX2	P32856	288 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TIE1	P35590	1138 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ELK3	P41970	407 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CHRNA4	P43681	627 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	STC1	P52823	247 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	GPX6	P59796	221 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	RPS14	P62263	151 aa	Known RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	DNAJC3	Q13217	504 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	GAS6	Q14393	721 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CRYM	Q14894	314 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	UAP1	Q16222	522 aa	Predicted RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	GPR33	Q49SQ1	333 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TNFAIP8L3	Q5GJ75	292 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CERCAM	Q5T4B2	595 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	PIP5KL1	Q5T9C9	394 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	AGBL4	Q5VU57	503 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	FBXO38	Q6PIJ6	1188 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CERS6	Q6ZMG9	384 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	UNC5A	Q6ZN44	842 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	C3orf62	Q6ZUJ4	267 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TECPR1	Q7Z6L1	1165 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	SLC26A11	Q86WA9	606 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ZSWIM9	Q86XI8	627 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TMPRSS6	Q8IU80	811 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	IGDCC3	Q8IVU1	814 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ZBED8	Q8IZ13	594 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	RIBC1	Q8N443	379 aa	Predicted RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TXNDC5	Q8NBS9	432 aa	Known RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	FBXO36	Q8NEA4	188 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	PPHLN1	Q8NEY8	458 aa	Known RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	MDGA1	Q8NFP4	955 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	OR13J1	Q8NGT2	312 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	FAM174A	Q8TBP5	190 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CALML6	Q8TD86	181 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	EID2B	Q96D98	161 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	RMDN1	Q96DB5	314 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	EXOC2	Q96KP1	924 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	KLHL32	Q96NJ5	620 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CYTH2	Q99418	400 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	MFSD1	Q9H3U5	465 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ZDHHC6	Q9H6R6	413 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TBC1D17	Q9HA65	648 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	LMAN1L	Q9HAT1	526 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ZFYVE1	Q9HBF4	777 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	PREB	Q9HCU5	417 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	POLM	Q9NP87	494 aa	Predicted RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	SAYSD1	Q9NPB0	183 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	ZDHHC4	Q9NPG8	344 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	NINJ2	Q9NZG7	142 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	UBP1	Q9NZI7	540 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	SAMD15	Q9P1V8	674 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	VPS18	Q9P253	973 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	SLC24A2	Q9UI40	661 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	APPL1	Q9UKG1	709 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	CORO1C	Q9ULV4	474 aa	Predicted RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	SIT1	Q9Y3P8	196 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	FADS3	Q9Y5Q0	445 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379		V9GYY5	206 aa	Predicted RBP	7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	TRIO	O75962	3097 aa		7.7	□□□□□ -1.18
RNF41-208	ENST00000550379	NUMA1	Q14980	2115 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	IGLV3-16	A0A075B6K0	115 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379		A0A087WUV0	522 aa	Predicted RBP	7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	TCRBV9S1A1T	A0A576	114 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	SPINT1	O43278	529 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	LAT	O43561	262 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	PLRG1	O43660	514 aa	Known RBP	7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	USP12	O75317	370 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	AVIL	O75366	819 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	GJB3	O75712	270 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	PIGN	O95427	931 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	HOXC4	P09017	264 aa	Predicted RBP	7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	HLA-E	P13747	358 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	AOC1	P19801	751 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	OGN	P20774	298 aa	Known RBP	7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	CNTF	P26441	200 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	MGAT1	P26572	445 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	OXTR	P30559	389 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	SLC8A1	P32418	973 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	HNF1B	P35680	557 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	HSD17B3	P37058	310 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	P2RY2	P41231	377 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	SPINT3	P49223	89 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	EPHB1	P54762	984 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	TAS2R38	P59533	333 aa		7.69	□□□□□ -1.18
RNF41-208	ENST00000550379	XIAP	P98170	497 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms