RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PUM1Q14671 1186 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 STAT4Q14765 748 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 GRM3Q14832 879 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 SIX1Q15475 284 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 PCSK7Q16549 785 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 QPCTQ16769 361 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 ARMC12Q5T9G4 340 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 KDELC1Q6UW63 502 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 PTAR1Q7Z6K3 402 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 RABEPKQ7Z6M1 372 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 LPCAT1Q8NF37 534 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 CXorf40AQ8TE69 158 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 NSMCE1Q8WV22 266 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 TEKT5Q96M29 485 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 LENG8Q96PV6 779 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 WDR24Q96S15 920 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 ELF4Q99607 663 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 RTKNQ9BST9 563 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 TM7SF3Q9NS93 570 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 PPIL1Q9Y3C6 166 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 SPO11Q9Y5K1 396 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 CFAP47Q6ZTR5 3102 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 TPRP12270 2363 aaKnown RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 NCOR2Q9Y618 2525 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 A0A0J9YYE9 177 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SPAARA0A1B0GVQ0 90 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 MIF4GDA9UHW6 222 aaKnown RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 H7C0C1 242 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PPP1R12AO14974 1030 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 KRT86O43790 486 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 OPHN1O60890 802 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CBFA2T3O75081 653 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PMPCBO75439 489 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 TM7SF2O76062 418 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 KCNK5O95279 499 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SOD1P00441 154 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 TRBC1P01850 177 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PCCBP05166 539 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CELA2BP08218 269 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 GIMD1P0DJR0 217 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 XPAP23025 273 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 VIPR1P32241 457 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CXCR5P32302 372 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 ETV3P41162 512 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 ATP5OP48047 213 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 ATXN3P54252 364 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 C21orf59P57076 290 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 EIF3EP60228 445 aaKnown RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PTSQ03393 145 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SGCGQ13326 291 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 TCEA2Q15560 299 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 TEAD4Q15561 434 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CFAP58Q5T655 872 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PSAPL1Q6NUJ1 521 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 KYAT3Q6YP21 454 aaKnown RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 DBX2Q6ZNG2 339 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 Q6ZVL8 140 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 DGLUCYQ7Z3D6 616 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 RBFAQ8N0V3 343 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 BBS5Q8N3I7 341 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SLC25A45Q8N413 288 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CCDC110Q8TBZ0 833 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 HTR3CQ8WXA8 447 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 ASB12Q8WXK4 309 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SCRN2Q96FV2 425 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 KLHDC7BQ96G42 594 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CALR3Q96L12 384 aaKnown RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 AGAP2Q99490 1192 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 MLPHQ9BV36 600 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 LGR4Q9BXB1 951 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 TSGA10Q9BZW7 698 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 ZDHHC5Q9C0B5 715 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SLC25A51Q9H1U9 297 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 PCDH9Q9HC56 1237 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 TRMT1Q9NXH9 659 aaKnown RBP11.24□□□□□ -0.61
RAB5B-208ENST00000550283 SMARCAL1Q9NZC9 954 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 AMACRQ9UHK6 382 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CD84Q9UIB8 345 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 EFR3BQ9Y2G0 817 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 OR1A2Q9Y585 309 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 CHD8Q9HCK8 2581 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 BPTFQ12830 3046 aa11.24□□□□□ -0.61
RAB5B-208ENST00000550283 ATRXP46100 2492 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 A6NNZ2 444 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 ENC1O14682 589 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 AURKAO14965 403 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 FANCGO15287 622 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 FOXD2O60548 495 aaPredicted RBP11.23□□□□□ -0.61
RAB5B-208ENST00000550283 CLDN7O95471 211 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 FUCA1P04066 466 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 ATXN1LP0C7T5 689 aaKnown RBP11.23□□□□□ -0.61
RAB5B-208ENST00000550283 ELFN1P0C7U0 828 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 RBP3P10745 1247 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 MYF5P13349 255 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms