RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 COQ6Q9Y2Z9 468 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 OR1A2Q9Y585 309 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCDHB1Q9Y5F3 818 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 DOCK9Q9BZ29 2069 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 WDFY3Q8IZQ1 3526 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 A0A087X0T9 212 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 TK2O00142 265 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PEX11BO96011 259 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 MPOP05164 745 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PYGLP06737 847 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 KRT7P08729 469 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 H2AFZP0C0S5 128 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 FAM228BP0C875 321 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 MYF5P13349 255 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PNLIPP16233 465 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 MX2P20592 715 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 CA4P22748 312 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 TEAD1P28347 426 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 HNRNPH3P31942 346 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 VIPR1P32241 457 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 SSR1P43307 286 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 SLC25A11Q02978 314 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 RALGDSQ12967 914 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 TRIM14Q14142 442 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 ARHGEF7Q14155 803 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 ARMC12Q5T9G4 340 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PNCKQ6P2M8 343 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 OGFOD3Q6PK18 319 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 H2AFVQ71UI9 128 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 RAVER1Q8IY67 606 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 KCTD6Q8NC69 237 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 WDR36Q8NI36 951 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 FAM71BQ8TC56 605 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PDCD6IPQ8WUM4 868 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 FATE1Q969F0 183 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 FUBP1Q96AE4 644 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 SCRN2Q96FV2 425 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 LGMNQ99538 433 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 CCDC3Q9BQI4 270 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 ANP32EQ9BTT0 268 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 DPH1Q9BZG8 443 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 POLR1EQ9GZS1 481 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PRORYQ9H606 182 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PHPT1Q9NRX4 125 aaPredicted RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 ZNHIT6Q9NWK9 470 aaKnown RBP10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 B4GALT6Q9UBX8 382 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 DNPEPQ9ULA0 475 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 GPR34Q9UPC5 381 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCDHGC4Q9Y5F7 938 aa10.91□□□□□ -0.66
VTI1BP3-201ENST00000550220 NTN3O00634 580 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 CBFA2T2O43439 604 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 HEXIM1O94992 359 aaKnown RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 CPP00450 1065 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 PRKCGP05129 697 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 TPM1P09493 284 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 MYCLP1P12525 358 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 GLB1P16278 677 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 ITPKBP27987 946 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 SOWAHCQ53LP3 525 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 USP45Q70EL2 814 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 GPR155Q7Z3F1 870 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 TAF8Q7Z7C8 310 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 NLRP8Q86W28 1048 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 CBARPQ8N350 705 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 TEX26Q8N6G2 289 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 OR8K1Q8NGG5 319 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCDH19Q8TAB3 1148 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 ZNF564Q8TBZ8 553 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 CTNNBL1Q8WYA6 563 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 TMEM159Q96B96 161 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 NUS1Q96E22 293 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 HIC2Q96JB3 615 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 COQ10AQ96MF6 247 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 TMEM74Q96NL1 305 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 SLC46A1Q96NT5 459 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 ZNF670Q9BS34 389 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 STRADBQ9C0K7 418 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 NOD2Q9HC29 1040 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 IFNKQ9P0W0 207 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 CTTNBP2NLQ9P2B4 639 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 APPL1Q9UKG1 709 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 PNMA8BQ9ULN7 279 aaPredicted RBP10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 PPIL1Q9Y3C6 166 aa10.9□□□□□ -0.66
VTI1BP3-201ENST00000550220 CCDC187A0A096LP49 1063 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 TEX51A0A1B0GUA7 166 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 SSU72P8A0A1W2PR75 194 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 MATN3O15232 486 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 PROSCO94903 275 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 PGLSO95336 258 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 GYPCP04921 128 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 TCF4P15884 667 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 ZNF30P17039 623 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 IL4RP24394 825 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 CCNCP24863 283 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 CASP14P31944 242 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 GARSP41250 739 aaKnown RBP10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 RPL26P61254 145 aaKnown RBP10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 TLE3Q04726 772 aa10.89□□□□□ -0.67
VTI1BP3-201ENST00000550220 DPTQ07507 201 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms