RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 CHKBQ9Y259 395 aa11.84□□□□□ -0.51
LETMD1-221ENST00000550100 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
LETMD1-221ENST00000550100 HEY1Q9Y5J3 304 aa11.84□□□□□ -0.51
LETMD1-221ENST00000550100 PKD1L2Q7Z442 2459 aa11.84□□□□□ -0.51
LETMD1-221ENST00000550100 CHD6Q8TD26 2715 aa11.83□□□□□ -0.51
LETMD1-221ENST00000550100 CFAP69A5D8W1 941 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TMEM202A6NGA9 273 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ZNF487B1APH4 448 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 SOCS5O75159 536 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 NDUFA10O95299 355 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CPP00450 1065 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PECAM1P16284 738 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CKMT2P17540 419 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 HNF1BP35680 557 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 YPEL5P62699 121 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 DYNLT1P63172 113 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ITKQ08881 620 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 DEFB133Q30KQ1 61 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 INAVAQ3KP66 663 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 DENND2CQ68D51 928 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 RHOT1Q8IXI2 618 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CCDC170Q8IYT3 715 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PHACTR4Q8IZ21 702 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CCNYQ8ND76 341 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ACRBPQ8NEB7 543 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TPCN2Q8NHX9 752 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 LMX1AQ8TE12 382 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 OR1E3Q8WZA6 343 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 HDAC11Q96DB2 347 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 APOLD1Q96LR9 279 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 IL12RB2Q99665 862 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 LRRC61Q9BV99 259 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 BRD8Q9H0E9 1235 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 MRPL40Q9NQ50 206 aaKnown RBP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PHTF1Q9UMS5 762 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ACACAQ13085 2346 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 AQP9O43315 295 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ELFN1P0C7U0 828 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TSHRP16473 764 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ACP1P24666 158 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 VIPR1P32241 457 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TRIM23P36406 574 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ETV3P41162 512 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 SLC1A1P43005 524 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 POLR2LP62875 67 aaKnown RBP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 SKOR1P84550 965 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PTSQ03393 145 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PPIDQ08752 370 aaKnown RBP11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ACOX1Q15067 660 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CDKN3Q16667 212 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PRRT3Q5FWE3 981 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ARMC12Q5T9G4 340 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CRTC1Q6UUV9 634 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ENPP7Q6UWV6 458 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 SPOCD1Q6ZMY3 1216 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 Q6ZVL8 140 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TECPR1Q7Z6L1 1165 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 RFX6Q8HWS3 928 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 CCDC13Q8IYE1 715 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 FGF22Q9HCT0 170 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 NLGN3Q9NZ94 848 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TRIM10Q9UDY6 481 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ZMIZ1Q9ULJ6 1067 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 TTLL3Q9Y4R7 772 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 PCDHGA1Q9Y5H4 931 aa11.83□□□□□ -0.52
LETMD1-221ENST00000550100 ARHGEF17Q96PE2 2063 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-221ENST00000550100 APOL1O14791 398 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 YY2O15391 372 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 SPOPO43791 374 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 RFPL3O75679 317 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 SOD1P00441 154 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 CKMT1AP12532 417 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 PEX5P50542 639 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 THOP1P52888 689 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 IFI35P80217 286 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-221ENST00000550100 INSM1Q01101 510 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-221ENST00000550100 NFATC4Q14934 902 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 RALGPS1Q5JS13 557 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 FAXCQ5TGI0 409 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 PNCKQ6P2M8 343 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 VSIG1Q86XK7 387 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 HID1Q8IV36 788 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 FAM181AQ8N9Y4 354 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 SPC24Q8NBT2 197 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 MDM1Q8TC05 714 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 NSMCE1Q8WV22 266 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 EID2BQ96D98 161 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 PDXPQ96GD0 296 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 AGAP2Q99490 1192 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 C1QTNF7Q9BXJ2 289 aa11.82□□□□□ -0.52
LETMD1-221ENST00000550100 TDRD1Q9BXT4 1180 aaKnown RBP11.82□□□□□ -0.52
LETMD1-221ENST00000550100 POLR1EQ9GZS1 481 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms