RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 POLG2Q9UHN1 485 aa15.04■□□□□ -0
CUX1-214ENST00000550008 KCTD3Q9Y597 815 aa15.04■□□□□ -0
CUX1-214ENST00000550008 MYH9P35579 1960 aaKnown RBP15.04■□□□□ -0
CUX1-214ENST00000550008 DDX60LQ5H9U9 1706 aaKnown RBP15.04■□□□□ -0
CUX1-214ENST00000550008 LTBP4Q8N2S1 1624 aa15.04■□□□□ -0
CUX1-214ENST00000550008 SOCS7O14512 581 aa15.04■□□□□ -0
CUX1-214ENST00000550008 CLPTM1O96005 669 aa15.04■□□□□ -0
CUX1-214ENST00000550008 C14orf80Q86SX3 495 aa15.04■□□□□ -0
CUX1-214ENST00000550008 ZNF555Q8NEP9 628 aa15.04■□□□□ -0
CUX1-214ENST00000550008 NTAN1Q96AB6 310 aa15.04■□□□□ -0
CUX1-214ENST00000550008 NMRK1Q9NWW6 199 aa15.04■□□□□ -0
CUX1-214ENST00000550008 ZNF212Q9UDV6 495 aa15.04■□□□□ -0
CUX1-214ENST00000550008 ZMYND8Q9ULU4 1186 aaPredicted RBP15.04■□□□□ -0
CUX1-214ENST00000550008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.04■□□□□ -0
CUX1-214ENST00000550008 NPEPPSL1A6NEC2 478 aa15.04■□□□□ -0
CUX1-214ENST00000550008 AZIN1O14977 448 aa15.04■□□□□ -0
CUX1-214ENST00000550008 IPO13O94829 963 aaKnown RBP15.04■□□□□ -0
CUX1-214ENST00000550008 TYMPP19971 482 aa15.04■□□□□ -0
CUX1-214ENST00000550008 TTPAP49638 278 aa15.04■□□□□ -0
CUX1-214ENST00000550008 AFTPHQ6ULP2 937 aa15.04■□□□□ -0
CUX1-214ENST00000550008 VPS37AQ8NEZ2 397 aa15.04■□□□□ -0
CUX1-214ENST00000550008 EPB41L4BQ9H329 900 aa15.04■□□□□ -0
CUX1-214ENST00000550008 TMEM161AQ9NX61 479 aa15.04■□□□□ -0
CUX1-214ENST00000550008 FLRT1Q9NZU1 646 aa15.04■□□□□ -0
CUX1-214ENST00000550008 LIMD1Q9UGP4 676 aa15.04■□□□□ -0
CUX1-214ENST00000550008 SORCS3Q9UPU3 1222 aa15.04■□□□□ -0
CUX1-214ENST00000550008 HS3ST4Q9Y661 456 aa15.04■□□□□ -0
CUX1-214ENST00000550008 TMEM233B4DJY2 109 aa15.03■□□□□ -0
CUX1-214ENST00000550008 C5orf58C9J3I9 102 aa15.03■□□□□ -0
CUX1-214ENST00000550008 F8W810 466 aa15.03■□□□□ -0
CUX1-214ENST00000550008 PGM3O95394 542 aa15.03■□□□□ -0
CUX1-214ENST00000550008 CXCL14O95715 111 aa15.03■□□□□ -0
CUX1-214ENST00000550008 NDST3O95803 873 aa15.03■□□□□ -0
CUX1-214ENST00000550008 GOT2P00505 430 aaKnown RBP15.03■□□□□ -0
CUX1-214ENST00000550008 NRG1Q02297 640 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 LPIN1Q14693 890 aa15.03■□□□□ -0
CUX1-214ENST00000550008 TSTD2Q5T7W7 516 aa15.03■□□□□ -0
CUX1-214ENST00000550008 TRAPPC5Q8IUR0 188 aa15.03■□□□□ -0
CUX1-214ENST00000550008 ST13P5Q8NFI4 369 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 NAT14Q8WUY8 206 aa15.03■□□□□ -0
CUX1-214ENST00000550008 PTPN18Q99952 460 aa15.03■□□□□ -0
CUX1-214ENST00000550008 ASAH2Q9NR71 780 aa15.03■□□□□ -0
CUX1-214ENST00000550008 FAM32AQ9Y421 112 aaKnown RBP15.03■□□□□ -0
CUX1-214ENST00000550008 MGAT4DA6NG13 374 aa15.03■□□□□ -0
CUX1-214ENST00000550008 TMEM114B3SHH9 223 aa15.03■□□□□ -0
CUX1-214ENST00000550008 RASSF9O75901 435 aa15.03■□□□□ -0
CUX1-214ENST00000550008 NTRK1P04629 796 aa15.03■□□□□ -0
CUX1-214ENST00000550008 ACRP10323 421 aa15.03■□□□□ -0
CUX1-214ENST00000550008 CCR10P46092 362 aa15.03■□□□□ -0
CUX1-214ENST00000550008 PRIM2P49643 509 aa15.03■□□□□ -0
CUX1-214ENST00000550008 MAPK10P53779 464 aa15.03■□□□□ -0
CUX1-214ENST00000550008 LSM12Q3MHD2 195 aaKnown RBP15.03■□□□□ -0
CUX1-214ENST00000550008 NKAPQ8N5F7 415 aaKnown RBP15.03■□□□□ -0
CUX1-214ENST00000550008 PPP2R3CQ969Q6 453 aa15.03■□□□□ -0
CUX1-214ENST00000550008 ZNF778Q96MU6 729 aa15.03■□□□□ -0
CUX1-214ENST00000550008 FAM124BQ9H5Z6 455 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 NENFQ9UMX5 172 aa15.03■□□□□ -0
CUX1-214ENST00000550008 UBXN8O00124 270 aa15.03■□□□□ -0
CUX1-214ENST00000550008 CLDN11O75508 207 aa15.03■□□□□ -0
CUX1-214ENST00000550008 UGT2B4P06133 528 aa15.03■□□□□ -0
CUX1-214ENST00000550008 EPB42P16452 691 aa15.03■□□□□ -0
CUX1-214ENST00000550008 VAC14Q08AM6 782 aa15.03■□□□□ -0
CUX1-214ENST00000550008 CDC16Q13042 620 aa15.03■□□□□ -0
CUX1-214ENST00000550008 INSCQ1MX18 579 aa15.03■□□□□ -0
CUX1-214ENST00000550008 SAMD4BQ5PRF9 694 aaKnown RBP15.03■□□□□ -0
CUX1-214ENST00000550008 PLPP4Q5VZY2 271 aa15.03■□□□□ -0
CUX1-214ENST00000550008 NUDT18Q6ZVK8 323 aa15.03■□□□□ -0
CUX1-214ENST00000550008 STK32CQ86UX6 486 aa15.03■□□□□ -0
CUX1-214ENST00000550008 HORMAD1Q86X24 394 aa15.03■□□□□ -0
CUX1-214ENST00000550008 RASAL3Q86YV0 1011 aa15.03■□□□□ -0
CUX1-214ENST00000550008 CLHC1Q8NHS4 586 aa15.03■□□□□ -0
CUX1-214ENST00000550008 SELENOMQ8WWX9 145 aa15.03■□□□□ -0
CUX1-214ENST00000550008 FAM126AQ9BYI3 521 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 PDP2Q9P2J9 529 aa15.03■□□□□ -0
CUX1-214ENST00000550008 FAM159BA6NKW6 160 aa15.03■□□□□ -0
CUX1-214ENST00000550008 DMC1Q14565 340 aa15.03■□□□□ -0
CUX1-214ENST00000550008 NET1Q7Z628 596 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 CENPLQ8N0S6 344 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 OR10T2Q8NGX3 314 aa15.03■□□□□ -0
CUX1-214ENST00000550008 FBXO30Q8TB52 745 aa15.03■□□□□ -0
CUX1-214ENST00000550008 SUSD3Q96L08 255 aa15.03■□□□□ -0
CUX1-214ENST00000550008 MMADHCQ9H3L0 296 aaPredicted RBP15.03■□□□□ -0
CUX1-214ENST00000550008 FKBPLQ9UIM3 349 aa15.03■□□□□ -0
CUX1-214ENST00000550008 AHSGP02765 367 aa15.02■□□□□ -0
CUX1-214ENST00000550008 MT-ND1P03886 318 aa15.02■□□□□ -0
CUX1-214ENST00000550008 FASP25445 335 aa15.02■□□□□ -0
CUX1-214ENST00000550008 IDH3AP50213 366 aa15.02■□□□□ -0
CUX1-214ENST00000550008 RPL38P63173 70 aaKnown RBP15.02■□□□□ -0
CUX1-214ENST00000550008 MAMDC4Q6UXC1 1216 aa15.02■□□□□ -0
CUX1-214ENST00000550008 KCTD13Q8WZ19 329 aa15.02■□□□□ -0
CUX1-214ENST00000550008 CAPN10Q9HC96 672 aa15.02■□□□□ -0
CUX1-214ENST00000550008 SPG21Q9NZD8 308 aa15.02■□□□□ -0
CUX1-214ENST00000550008 SLC12A4Q9UP95 1085 aa15.02■□□□□ -0
CUX1-214ENST00000550008 TDRKHQ9Y2W6 561 aaKnown RBP15.02■□□□□ -0
CUX1-214ENST00000550008 ITGB1P05556 798 aa15.02■□□□□ -0
CUX1-214ENST00000550008 ZNF865P0CJ78 1059 aaPredicted RBP15.02■□□□□ -0
CUX1-214ENST00000550008 CTNNB1P35222 781 aa15.02■□□□□ -0
CUX1-214ENST00000550008 MLLT6P55198 1093 aaPredicted RBP15.02■□□□□ -0
CUX1-214ENST00000550008 PRKD1Q15139 912 aaPredicted RBP15.02■□□□□ -0
CUX1-214ENST00000550008 PITRM1Q5JRX3 1037 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms