RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MFSD7Q6UXD7 560 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 HDXQ7Z353 690 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 DEFB106AQ8N104 65 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 BANPQ8N9N5 519 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 FAM172AQ8WUF8 416 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 BICD1Q96G01 975 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF419Q96HQ0 510 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF317Q96PQ6 595 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PRRX2Q99811 253 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TIMM29Q9BSF4 260 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NUSAP1Q9BXS6 441 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ULBP1Q9BZM6 244 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TRPM5Q9NZQ8 1165 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 SUCOQ9UBS9 1254 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ADGRE2Q9UHX3 823 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 LNPEPQ9UIQ6 1025 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TSR3Q9UJK0 312 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PPIEQ9UNP9 301 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 GFYI3L273 518 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 MYO1CO00159 1063 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GRM6O15303 877 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 OPA1O60313 960 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DNAJC8O75937 253 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ZWINTO95229 277 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 IMPDH2P12268 514 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SLC6A4P31645 630 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CLCN5P51795 746 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CCNG1P51959 295 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GPX6P59796 221 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RPL7AP62424 266 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DHX9Q08211 1270 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ABRQ12979 859 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CLN3Q13286 438 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 BIKQ13323 160 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CCINQ13939 588 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 TWF2Q6IBS0 349 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 BRSK1Q8TDC3 778 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DNASE2BQ8WZ79 361 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RAPGEF5Q92565 580 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SMARCD2Q92925 531 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 BOD1Q96IK1 185 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ANKRD27Q96NW4 1050 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 HPS4Q9NQG7 708 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 INTS7Q9NVH2 962 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SLC4A7Q9Y6M7 1214 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 A0A087WUV0 522 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 A8MVJ9 347 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 F8W8V4 182 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GOLGA8SH3BPF8 625 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 KPNA5O15131 536 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SGTAO43765 313 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SUSD5O60279 629 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DFNA5O60443 496 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SLCO2B1O94956 709 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PGLSO95336 258 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GAS8O95995 478 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ATP2A2P16615 1042 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 HMGCLP35914 325 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 OPRD1P41143 372 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DR1Q01658 176 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PTK2BQ14289 1009 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC153Q494R4 210 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SETMARQ53H47 684 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SPOPLQ6IQ16 392 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 NAPEPLDQ6IQ20 393 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 LVRNQ6Q4G3 990 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 VHLLQ6RSH7 139 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 UNC5DQ6UXZ4 953 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PPM1KQ8N3J5 372 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PGBD5Q8N414 524 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 STAMQ92783 540 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CXorf40BQ96DE9 158 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 P2RY11Q96G91 374 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SCLT1Q96NL6 688 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DERL2Q9GZP9 239 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RNF208Q9H0X6 261 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 MIR1-1HGQ9H1L0 117 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PCIF1Q9H4Z3 704 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 LIN7BQ9HAP6 207 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SLC52A3Q9NQ40 469 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ANAPC7Q9UJX3 599 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 NEMP1O14524 444 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RAD51CO43502 376 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RNF8O76064 485 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GRIA2P42262 883 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RPL21P46778 160 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RXRGP48443 463 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SLC11A2P49281 568 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 LIMK2P53671 638 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RPS26P62854 115 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PFKPQ01813 784 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 POU4F1Q01851 419 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 KRT72Q14CN4 511 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CYP2A13Q16696 494 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 KYNUQ16719 465 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CTXN3Q4LDR2 81 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DCAF17Q5H9S7 520 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RARS2Q5T160 578 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms