RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 NFKBIBQ15653 356 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 ALG11Q2TAA5 492 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 PNCKQ6P2M8 343 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 FOXR1Q6PIV2 292 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 OGFOD3Q6PK18 319 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 LIPIQ6XZB0 460 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 CCDC81Q6ZN84 652 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 RAB11FIP2Q7L804 512 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 ZNF571Q7Z3V5 609 aaPredicted RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 ZNF605Q86T29 641 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 NLRP8Q86W28 1048 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 RBFAQ8N0V3 343 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 AVL9Q8NBF6 648 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 PDCD6IPQ8WUM4 868 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 TSACCQ96A04 125 aaPredicted RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 NUS1Q96E22 293 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 SCRN2Q96FV2 425 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 ATXN7L3BQ96GX2 97 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 ZNF830Q96NB3 372 aaPredicted RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 LRRN3Q9H3W5 708 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 STN1Q9H668 368 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.67□□□□□ -0.86
GCN1-205ENST00000548821 ZNHIT6Q9NWK9 470 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 TRNAU1APQ9NX07 287 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 CWC15Q9P013 229 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 LUC7L2Q9Y383 392 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 OR1A2Q9Y585 309 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 ENTPD2Q9Y5L3 495 aa9.67□□□□□ -0.86
GCN1-205ENST00000548821 DSPP15924 2871 aaKnown RBP9.67□□□□□ -0.86
GCN1-205ENST00000548821 LY6G6EA0A0G2JKS1 128 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 RHPN2P1A8MT19 583 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 NTN3O00634 580 aaPredicted RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 NVLO15381 856 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 TEX33O43247 280 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 BUB1BO60566 1050 aaPredicted RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 RPLP0P05388 317 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 KRT7P08729 469 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 SLC2A4P14672 509 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CCKBRP32239 447 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 MMP13P45452 471 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 GPR3P46089 330 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CLDN6P56747 220 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 UBASH3AP57075 661 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 RPL26P61254 145 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 ZBED6P86452 979 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 PDK2Q15119 407 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 C14orf28Q4W4Y0 310 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 LRRC73Q5JTD7 316 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 APTXQ7Z2E3 356 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 POLNQ7Z5Q5 900 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CLEC14AQ86T13 490 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 PIM3Q86V86 326 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CCNJLQ8IV13 435 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 NIPA2Q8N8Q9 360 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 KCTD6Q8NC69 237 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 GPR156Q8NFN8 814 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 PCDH19Q8TAB3 1148 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 SNRNP27Q8WVK2 155 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 HSPH1Q92598 858 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 SRPK1Q96SB4 655 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 KCTD15Q96SI1 283 aaPredicted RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 SYT11Q9BT88 431 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 MAGEB5Q9BZ81 275 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 POLR1EQ9GZS1 481 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 CLPBQ9H078 707 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 KLC2Q9H0B6 622 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CDH19Q9H159 772 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 EPB41L5Q9HCM4 733 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CYP4F12Q9HCS2 524 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 SIRPGQ9P1W8 387 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 LRIT1Q9P2V4 623 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 UVRAGQ9P2Y5 699 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 RPL26L1Q9UNX3 145 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 COQ6Q9Y2Z9 468 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 U3KQA8 63 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 TRPM6Q9BX84 2022 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 CACNA1GO43497 2377 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 ACACAQ13085 2346 aa9.66□□□□□ -0.86
GCN1-205ENST00000548821 NYNRINQ9P2P1 1898 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 GOLGA4Q13439 2230 aaKnown RBP9.66□□□□□ -0.86
GCN1-205ENST00000548821 FREM2Q5SZK8 3169 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 DOCK4Q8N1I0 1966 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 TRAFD1O14545 582 aaPredicted RBP9.65□□□□□ -0.86
GCN1-205ENST00000548821 HTRA2O43464 458 aaPredicted RBP9.65□□□□□ -0.86
GCN1-205ENST00000548821 CPNE6O95741 557 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 CCNB1P14635 433 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 CCNCP24863 283 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 TNNT3P45378 269 aaPredicted RBP9.65□□□□□ -0.86
GCN1-205ENST00000548821 OGDHQ02218 1023 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 CFHR1Q03591 330 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 DPTQ07507 201 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 TRA2AQ13595 282 aaKnown RBP eCLIP9.65□□□□□ -0.86
GCN1-205ENST00000548821 LRP8Q14114 963 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 DPYSQ14117 519 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 IFI16Q16666 785 aaKnown RBP9.65□□□□□ -0.86
GCN1-205ENST00000548821 CERCAMQ5T4B2 595 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 ZFYVE27Q5T4F4 411 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.86
GCN1-205ENST00000548821 CAVIN1Q6NZI2 390 aaKnown RBP9.65□□□□□ -0.86
GCN1-205ENST00000548821 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms