RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 F8VZ95 297 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 MKRN2OSH3BPM6 223 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 HGSO14964 777 aaPredicted RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 ZW10O43264 779 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 GFPT2O94808 682 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CLDN1O95832 211 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CD160O95971 181 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CALB1P05937 261 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 TIMP2P16035 220 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 PNLIPP16233 465 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 EEF1GP26641 437 aaKnown RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 EPHB2P29323 1055 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 NSFP46459 744 aaKnown RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 HK3P52790 923 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 SRP54P61011 504 aaKnown RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 CDR2Q01850 454 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 C1QBPQ07021 282 aaKnown RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 CDC20Q12834 499 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 ARHGEF7Q14155 803 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 IRF4Q15306 451 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CLPPQ16740 277 aaPredicted RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 TMEM52BQ4KMG9 183 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 MIIPQ5JXC2 388 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 FKBP15Q5T1M5 1219 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 TRNP1Q6NT89 227 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 NLRP14Q86W24 1093 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 DNAAF5Q86Y56 855 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CCNJLQ8IV13 435 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 SLITRK4Q8IW52 837 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CCDC112Q8NEF3 446 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 GPT2Q8TD30 523 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 HCAR2Q8TDS4 363 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 TSACCQ96A04 125 aaPredicted RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 KIAA1143Q96AT1 154 aaPredicted RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 HMCESQ96FZ2 354 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 WDR92Q96MX6 357 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 TAAR9Q96RI9 348 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 APOOQ9BUR5 198 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 SUV39H2Q9H5I1 410 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 MBNL1Q9NR56 388 aaKnown RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 NDFIP2Q9NV92 336 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 SEPT11Q9NVA2 429 aaKnown RBP8.53□□□□□ -1.04
TROAP-208ENST00000548817 ADAM22Q9P0K1 906 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 KLQ9UEF7 1012 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 RABGEF1Q9UJ41 708 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 APPL1Q9UKG1 709 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 TP53TG5Q9Y2B4 290 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 MFHAS1Q9Y4C4 1052 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 DAAM1Q9Y4D1 1078 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CHD5Q8TDI0 1954 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 CCDC168Q8NDH2 2452 aa8.53□□□□□ -1.04
TROAP-208ENST00000548817 C2CD4BA6NLJ0 364 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 TTLL8A6PVC2 850 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 RASA4BC9J798 803 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 FAM72CH0Y354 149 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 CACNB4O00305 520 aaPredicted RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 RASA4O43374 803 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 HNRNPRO43390 633 aaKnown RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 CREB3O43889 395 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 PTMSP20962 102 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 GPD1P21695 349 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 MMP8P22894 467 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 KELP23276 732 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 UGT1A3P35503 534 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 STAT1P42224 750 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 COPB1P53618 953 aaKnown RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 POLR2FP61218 127 aaKnown RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 POLR2LP62875 67 aaKnown RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 BIRC2Q13490 618 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 INPP5AQ14642 412 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 NFATC4Q14934 902 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 TCEA2Q15560 299 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 PARP15Q460N3 678 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 TCP11X2Q5H9J9 407 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 FAM72AQ5TYM5 149 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 MANEALQ5VSG8 457 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 FAM72DQ6L9T8 149 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 BRAT1Q6PJG6 821 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 TAF8Q7Z7C8 310 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 FAM72BQ86X60 149 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 CCDC13Q8IYE1 715 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 CACNA2D3Q8IZS8 1091 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 CCDC185Q8N715 623 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 RTL3Q8N8U3 475 aaKnown RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 Q8N9G6 341 aaPredicted RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 KYQ8NBH2 561 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 TP53I13Q8NBR0 393 aaPredicted RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 PCDH19Q8TAB3 1148 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 SLC30A5Q8TAD4 765 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 CPT1CQ8TCG5 803 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 EPS8L1Q8TE68 723 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 SLC20A1Q8WUM9 679 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 CENPIQ92674 756 aaPredicted RBP8.52□□□□□ -1.05
TROAP-208ENST00000548817 NTAN1Q96AB6 310 aa8.52□□□□□ -1.05
TROAP-208ENST00000548817 ZNF641Q96N77 438 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms