RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 C12orf40Q86WS4 652 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 CTAGE3PQ8IX95 158 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 KIRREL3Q8IZU9 778 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 PHTF2Q8N3S3 785 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 LSM14AQ8ND56 463 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 TTC16Q8NEE8 873 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 JOSD2Q8TAC2 188 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 SH3RF2Q8TEC5 729 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 SREK1Q8WXA9 508 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 TFAP2BQ92481 460 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 PTPRN2Q92932 1015 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 MRRFQ96E11 262 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 IFT43Q96FT9 208 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 TRMT2BQ96GJ1 504 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 TMEM176AQ96HP8 235 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 DCBLD2Q96PD2 775 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 CENPKQ9BS16 269 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 CALN1Q9BXU9 219 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 NMUR2Q9GZQ4 415 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 LINC00597Q9H2U6 94 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 ASB7Q9H672 318 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 PLEKHA5Q9HAU0 1116 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 VCX3AQ9NNX9 186 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 RAB6BQ9NRW1 208 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 PPARGC1AQ9UBK2 798 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 BCAP29Q9UHQ4 241 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 MID2Q9UJV3 735 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 ARHGAP26Q9UNA1 814 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDK4-205ENST00000547853 HBS1LQ9Y450 684 aaKnown RBP9.9□□□□□ -0.82
CDK4-205ENST00000547853 CKAP5Q14008 2032 aa9.9□□□□□ -0.82
CDK4-205ENST00000547853 DOPEY2Q9Y3R5 2298 aa9.9□□□□□ -0.83
CDK4-205ENST00000547853 MYO9AB2RTY4 2548 aa9.9□□□□□ -0.83
CDK4-205ENST00000547853 LRRK2Q5S007 2527 aa9.9□□□□□ -0.83
CDK4-205ENST00000547853 C2CD4BA6NLJ0 364 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 GOLGA8RI6L899 631 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 CCNT2O60583 730 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 CILPO75339 1184 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 H2AFYO75367 372 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 GCATO75600 419 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 KAT7O95251 611 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 C1QAP02745 245 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 PDHA1P08559 390 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 USP17L7P0C7H9 530 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 ATXN1LP0C7T5 689 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 CSH1P0DML2 217 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 CSH2P0DML3 217 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 PIM1P11309 404 aaPredicted RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 ANPEPP15144 967 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 GABRG2P18507 467 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 TIE1P35590 1138 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 FDFT1P37268 417 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 TNFSF9P41273 254 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 CACNA2D1P54289 1103 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 ZXDBP98169 803 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 TFAMQ00059 246 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 BST1Q10588 318 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 THOC5Q13769 683 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 FSCBQ5H9T9 825 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 FAM102AQ5T9C2 384 aaPredicted RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 SDHAF4Q5VUM1 108 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 STEAP4Q687X5 459 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 OR52E8Q6IFG1 317 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 RFWD3Q6PCD5 774 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 SLC36A4Q6YBV0 504 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 MARK2Q7KZI7 788 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 TMEM126BQ8IUX1 230 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 ULK2Q8IYT8 1036 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 ST13P4Q8IZP2 240 aaPredicted RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 ARFGAP1Q8N6T3 406 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 PPM1NQ8N819 430 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 PPP1R14CQ8TAE6 165 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 PPP4R1Q8TF05 950 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 HSPH1Q92598 858 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 ELMO3Q96BJ8 720 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 CMTM5Q96DZ9 223 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 MYRFLQ96LU7 910 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 CYP2S1Q96SQ9 504 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 EBNA1BP2Q99848 306 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 CCDC106Q9BWC9 280 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 TRIM4Q9C037 500 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 USP29Q9HBJ7 922 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 EIF2B3Q9NR50 452 aaKnown RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 MRGBPQ9NV56 204 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 ETNK2Q9NVF9 386 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 TMLHEQ9NVH6 421 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 DNAJC28Q9NX36 388 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 RCOR3Q9P2K3 495 aaPredicted RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 DCDC2Q9UHG0 476 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 MAGED2Q9UNF1 606 aaPredicted RBP9.89□□□□□ -0.83
CDK4-205ENST00000547853 PLA2G4CQ9UP65 541 aa9.89□□□□□ -0.83
CDK4-205ENST00000547853 TCRBV7S3A2A0A539 114 aa9.88□□□□□ -0.83
CDK4-205ENST00000547853 FAM149AA5PLN7 773 aa9.88□□□□□ -0.83
CDK4-205ENST00000547853 C2orf78A6NCI8 922 aa9.88□□□□□ -0.83
CDK4-205ENST00000547853 H3BRJ5 948 aa9.88□□□□□ -0.83
CDK4-205ENST00000547853 M0QYV0 167 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms