RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 HCSTQ9UBK5 93 aa15.57■□□□□ 0.08
BRF1-212ENST00000547562 SUFUQ9UMX1 484 aa15.57■□□□□ 0.08
BRF1-212ENST00000547562 ANKRD36A6QL64 1941 aa15.57■□□□□ 0.08
BRF1-212ENST00000547562 TET1Q8NFU7 2136 aa15.57■□□□□ 0.08
BRF1-212ENST00000547562 CD3EAPO15446 510 aaKnown RBP15.56■□□□□ 0.08
BRF1-212ENST00000547562 UPP2O95045 317 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 PENKP01210 267 aaPredicted RBP15.56■□□□□ 0.08
BRF1-212ENST00000547562 FDXRP22570 491 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 KCNC1P48547 511 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 C1QTNF8P60827 252 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 GALNT3Q14435 633 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 PTPRCAPQ14761 206 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 LRRC36Q1X8D7 754 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 C5orf22Q49AR2 442 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 ALG1LQ6GMV1 187 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 BRSK1Q8TDC3 778 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 PPP2R3CQ969Q6 453 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 TRMOQ9BU70 441 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 MRGBPQ9NV56 204 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 SRRDQ9UH36 339 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 MTF2Q9Y483 593 aaPredicted RBP15.56■□□□□ 0.08
BRF1-212ENST00000547562 GBF1Q92538 1859 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 A0A0D9SEW6 157 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 CASQ2O14958 399 aaPredicted RBP15.56■□□□□ 0.08
BRF1-212ENST00000547562 NBNO60934 754 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 RPP40O75818 363 aaKnown RBP15.56■□□□□ 0.08
BRF1-212ENST00000547562 SERPINF2P08697 491 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 SELPP16109 830 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 PEX2P28328 305 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 MRNIPQ6NTE8 343 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 ZNF549Q6P9A3 640 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 APLFQ8IW19 511 aaPredicted RBP15.56■□□□□ 0.08
BRF1-212ENST00000547562 DBF4BQ8NFT6 615 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 L3HYPDHQ96EM0 354 aa15.56■□□□□ 0.08
BRF1-212ENST00000547562 CCDC162PA2VCL2 907 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 SLC38A8A6NNN8 435 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 CFLARO15519 480 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 SLC4A1P02730 911 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 HOXB8P17481 243 aaPredicted RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 ATF6P18850 670 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 XRCC1P18887 633 aaPredicted RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 HOXD9P28356 352 aaPredicted RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 SLC6A4P31645 630 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 DPP6P42658 865 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 INHBCP55103 352 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 XIAPP98170 497 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 CEACAM7Q14002 265 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 TRIP10Q15642 601 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 SFT2D3Q587I9 215 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 ZNF678Q5SXM1 525 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 OR13C4Q8NGS5 318 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 C2orf15Q8WU43 125 aaKnown RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 PTERQ96BW5 349 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 EBF3Q9H4W6 596 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 NT5C1B-RDH14C9J2C7 533 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 H7C4K7 107 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 UBFD1O14562 309 aaKnown RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 PIRTP0C851 137 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 PKNOX1P55347 436 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 NFKB2Q00653 900 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 TIAL1Q01085 375 aaKnown RBP eCLIP15.55■□□□□ 0.08
BRF1-212ENST00000547562 GNA12Q03113 381 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 ELAVL2Q12926 359 aaKnown RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 FLOT2Q14254 428 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 SEMA3AQ14563 771 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 OR52E8Q6IFG1 317 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 GK5Q6ZS86 529 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 OR52K2Q8NGK3 314 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 USP13Q92995 863 aaPredicted RBP15.55■□□□□ 0.08
BRF1-212ENST00000547562 NPAS2Q99743 824 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 MGME1Q9BQP7 344 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 MAGEH1Q9H213 219 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 RIMKLBQ9ULI2 386 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 PSMD13Q9UNM6 376 aa15.55■□□□□ 0.08
BRF1-212ENST00000547562 UBDO15205 165 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 ACSL4O60488 711 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 SUPT7LO94864 414 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 NDST3O95803 873 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 CD1DP15813 335 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 SUOXP51687 545 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 SQLEQ14534 574 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 GPNMBQ14956 572 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 ANKS3Q6ZW76 656 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 BBS5Q8N3I7 341 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 HMGCLL1Q8TB92 370 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 TRIB3Q96RU7 358 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 CDK5RAP1Q96SZ6 601 aaKnown RBP15.54■□□□□ 0.08
BRF1-212ENST00000547562 TTLL2Q9BWV7 592 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 MRPL1Q9BYD6 325 aaKnown RBP15.54■□□□□ 0.08
BRF1-212ENST00000547562 PPP1R12CQ9BZL4 782 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 CATSPERZQ9NTU4 200 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 POLR3BQ9NW08 1133 aaPredicted RBP15.54■□□□□ 0.08
BRF1-212ENST00000547562 UTP6Q9NYH9 597 aaKnown RBP15.54■□□□□ 0.08
BRF1-212ENST00000547562 BCAP29Q9UHQ4 241 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 DNMT3LQ9UJW3 386 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 TRAF6Q9Y4K3 522 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 ACTL7AQ9Y615 435 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 STX16-NPEPL1H3BU86 382 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 ARVCFO00192 962 aa15.54■□□□□ 0.08
BRF1-212ENST00000547562 TRPA1O75762 1119 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms