RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 BBS2Q9BXC9 721 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 ACE2Q9BYF1 805 aaPredicted RBP12□□□□□ -0.49
CCDC38-202ENST00000546386 ARL8BQ9NVJ2 186 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 ZFP69BQ9UJL9 534 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 LOC285095A0A1B0GVY8 99 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 KRT87PA6NCN2 255 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 G3V2L1 256 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 GSTA2P09210 222 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC38-202ENST00000546386 MPSTP25325 297 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 RFC2P35250 354 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 CD151P48509 253 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 CDH13P55290 713 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 NCALDP61601 193 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 ITIH4Q14624 930 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 SHHQ15465 462 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 ZNF549Q6P9A3 640 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 MAVSQ7Z434 540 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 MAPK15Q8TD08 544 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 PPP4R1Q8TF05 950 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 KLHL29Q96CT2 875 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 SLC45A3Q96JT2 553 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 SLC30A3Q99726 388 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 RHOJQ9H4E5 214 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 TNFRSF12AQ9NP84 129 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 SIRPGQ9P1W8 387 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 DCDC2Q9UHG0 476 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 PACSIN3Q9UKS6 424 aa12□□□□□ -0.49
CCDC38-202ENST00000546386 ILVBLA1L0T0 632 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 MEI4A8MW99 385 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 E9PBE3 544 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 CD3EAPO15446 510 aaKnown RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 KLHL41O60662 606 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 GLRA3O75311 464 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 ENO1P06733 434 aaKnown RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 T-ENOLP0DO92 83 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 NCF2P19878 526 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 HTRA4P83105 476 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 LY6G5CQ5SRR4 150 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 LYSMD3Q7Z3D4 306 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 ELMOD1Q8N336 334 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 GDPD5Q8WTR4 605 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 TRMT2BQ96GJ1 504 aaKnown RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 POLR3BQ9NW08 1133 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 TBC1D30Q9Y2I9 924 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 ACOT9Q9Y305 439 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 COL4A4P53420 1690 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 TRAV19A0A0A6YYK7 116 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 OTOL1A6NHN0 477 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 ANKRD66B4E2M5 251 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 ZBTB14O43829 449 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 SIX3O95343 332 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 CLDN7O95471 211 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 S1PR4O95977 384 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 CEBPBP17676 345 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 HADHAP40939 763 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 GRIA4P48058 902 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 RAB10P61026 200 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 OCRLQ01968 901 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 PABPC1LQ4VXU2 614 aaKnown RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 Q6ZVU0 165 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 CDKN2AIPNLQ96HQ2 116 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 SORT1Q99523 831 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 GPR22Q99680 433 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 MGME1Q9BQP7 344 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 BOCQ9BWV1 1114 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 GATA5Q9BWX5 397 aaPredicted RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 TDRD1Q9BXT4 1180 aaKnown RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 CIPCQ9C0C6 399 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 PIDD1Q9HB75 910 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 RXFP1Q9HBX9 757 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 SLC40A1Q9NP59 571 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 SSU72Q9NP77 194 aaKnown RBP11.99□□□□□ -0.49
CCDC38-202ENST00000546386 USH1CQ9Y6N9 552 aa11.99□□□□□ -0.49
CCDC38-202ENST00000546386 MROH6A6NGR9 719 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 WASH3PC4AMC7 463 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 MOSPD3O75425 235 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 MTX2O75431 263 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 GLP2RO95838 553 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 EPHA3P29320 983 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 NRIP1P48552 1158 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 ZNF33AQ06730 810 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 SETDB1Q15047 1291 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 PDCD2Q16342 344 aaPredicted RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 HECTD2Q5U5R9 776 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 TMEM198Q66K66 360 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CLNKQ7Z7G1 428 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 TREML1Q86YW5 311 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CHST14Q8NCH0 376 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 C2CD4AQ8NCU7 369 aaPredicted RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CLP1Q92989 425 aaKnown RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 TRIB3Q96RU7 358 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CDK5RAP1Q96SZ6 601 aaKnown RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 C1QTNF1Q9BXJ1 281 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 NUF2Q9BZD4 464 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms