RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SMIM14Q96QK8 99 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 MCCC1Q96RQ3 725 aaPredicted RBP16.87■□□□□ 0.29
LTBR-215ENST00000546296 OSBPL9Q96SU4 736 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 NAP1L3Q99457 506 aaPredicted RBP16.87■□□□□ 0.29
LTBR-215ENST00000546296 TMEM9BQ9NQ34 198 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 HOMER3Q9NSC5 361 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 SNX12Q9UMY4 172 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 SNX11Q9Y5W9 270 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 PTPRZ1P23471 2315 aaPredicted RBP16.87■□□□□ 0.29
LTBR-215ENST00000546296 FAM186AA6NE01 2351 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 CAPN8A6NHC0 703 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 A6NNZ2 444 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 GCATO75600 419 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 RECQL5O94762 991 aaPredicted RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 NDST3O95803 873 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 IFNB1P01574 187 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 THEGLP0DJG4 465 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 PSMB4P28070 264 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 BNC1Q01954 994 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 OVGP1Q12889 678 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 MPP3Q13368 585 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 CNGA3Q16281 694 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 HLA-BQ31612 363 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 STPG1Q5TH74 334 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 CRTC1Q6UUV9 634 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 KDELC1Q6UW63 502 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 GCNT7Q6ZNI0 430 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 Q6ZSR6 202 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 PTAR1Q7Z6K3 402 aaPredicted RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 TSPAN33Q86UF1 283 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 C17orf53Q8N3J3 647 aaPredicted RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 MINDY1Q8N5J2 469 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 DENND6BQ8NEG7 585 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 CENPTQ96BT3 561 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 LRRC45Q96CN5 670 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 OXNAD1Q96HP4 312 aaPredicted RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 TRIB3Q96RU7 358 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 KLF6Q99612 283 aaPredicted RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 FSD1LQ9BXM9 530 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 GDF3Q9NR23 364 aa16.86■□□□□ 0.29
LTBR-215ENST00000546296 AAR2Q9Y312 384 aaKnown RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
LTBR-215ENST00000546296 GVINP1Q7Z2Y8 2422 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 CTAGE9A4FU28 777 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 POM121BA6NF01 834 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 C4orf47A7E2U8 309 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 H0Y8X5 98 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 PGRMC1O00264 195 aaKnown RBP16.85■□□□□ 0.29
LTBR-215ENST00000546296 CER1O95813 267 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 LHCGRP22888 699 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 ACTN2P35609 894 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 CTSKP43235 329 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 GDF10P55107 478 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 SIX1Q15475 284 aaPredicted RBP16.85■□□□□ 0.29
LTBR-215ENST00000546296 OASLQ15646 514 aaKnown RBP16.85■□□□□ 0.29
LTBR-215ENST00000546296 PARP6Q2NL67 630 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 WSCD2Q2TBF2 565 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 UAP1L1Q3KQV9 507 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 LRRC66Q68CR7 880 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 GSTA5Q7RTV2 222 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 HSD11B1LQ7Z5J1 315 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 ABI3BPQ7Z7G0 1075 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 RASGEF1CQ8N431 466 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 SLC25A41Q8N5S1 370 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 CCDC89Q8N998 374 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 OR2I1PQ8NGU4 316 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 COG1Q8WTW3 980 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 BMFQ96LC9 184 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 WDR24Q96S15 920 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 NAPGQ99747 312 aaPredicted RBP16.85■□□□□ 0.29
LTBR-215ENST00000546296 GAREM1Q9H706 876 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 MBNL1Q9NR56 388 aaKnown RBP16.85■□□□□ 0.29
LTBR-215ENST00000546296 KCND1Q9NSA2 647 aa16.85■□□□□ 0.29
LTBR-215ENST00000546296 DRG1Q9Y295 367 aaKnown RBP16.85■□□□□ 0.29
LTBR-215ENST00000546296 A0A0U1RQS6 177 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 C1orf232A0A0U1RR37 186 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 GOLGA6CA6NDK9 693 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 GOLGA6BA6NDN3 693 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 PSMD11O00231 422 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 CLDN7O95471 211 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 EPOP01588 193 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 PCCBP05166 539 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 ITGAVP06756 1048 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 GOLGA6DP0CG33 693 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 ZNF30P17039 623 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 TCP1P17987 556 aaKnown RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 RABIFP47224 123 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 NXPH1P58417 271 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 AGERQ15109 404 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 IRF4Q15306 451 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 P3H1Q32P28 736 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 DCP2Q8IU60 420 aaKnown RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 TAB3Q8N5C8 712 aaPredicted RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 TP53I13Q8NBR0 393 aaPredicted RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 OR13H1Q8NG92 308 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 CCHCR1Q8TD31 782 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 NETO1Q8TDF5 533 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 NUS1Q96E22 293 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms