RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 OR56A4Q8NGH8 313 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 HTR3CQ8WXA8 447 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 AGPAT1Q99943 283 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 SNRNP25Q9BV90 132 aaKnown RBP12.61□□□□□ -0.39
COPS7A-221ENST00000546229 TMEM168Q9H0V1 697 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 SYNDIG1Q9H7V2 258 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 CHMP5Q9NZZ3 219 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 LOXL2Q9Y4K0 774 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 PRAMEF33A0A0G2JMD5 474 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 LRRC10BA6NIK2 292 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
COPS7A-221ENST00000546229 HTRA2O43464 458 aaPredicted RBP12.6□□□□□ -0.39
COPS7A-221ENST00000546229 NUDT21O43809 227 aaKnown RBP12.6□□□□□ -0.39
COPS7A-221ENST00000546229 PRAMEF10O60809 474 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 LIPCP11150 499 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 HTR1BP28222 390 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 MAMLD1Q13495 774 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 C16orf72Q14CZ0 275 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 ZSCAN23Q3MJ62 389 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 SPECC1LQ69YQ0 1117 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 ERAP2Q6P179 960 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 SCYL2Q6P3W7 929 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 RFX8Q6ZV50 586 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 TMEM74Q96NL1 305 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 PSKH2Q96QS6 385 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 NCAPGQ9BPX3 1015 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 FRMD8Q9BZ67 464 aaPredicted RBP12.6□□□□□ -0.39
COPS7A-221ENST00000546229 ATP13A3Q9H7F0 1226 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 STARD5Q9NSY2 213 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 PISDQ9UG56 409 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
COPS7A-221ENST00000546229 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 PRSS38A1L453 326 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
COPS7A-221ENST00000546229 SOD1P00441 154 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 CTSEP14091 401 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 ERCC2P18074 760 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 LHCGRP22888 699 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 SERPINA4P29622 427 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 NSUN2Q08J23 767 aaKnown RBP eCLIP12.59□□□□□ -0.39
COPS7A-221ENST00000546229 CNGA3Q16281 694 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 ACAD10Q6JQN1 1059 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 ZNF574Q6ZN55 896 aaPredicted RBP12.59□□□□□ -0.39
COPS7A-221ENST00000546229 RD3Q7Z3Z2 195 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 PGBD5Q8N414 524 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 GPBAR1Q8TDU6 330 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 SCG3Q8WXD2 468 aaKnown RBP12.59□□□□□ -0.39
COPS7A-221ENST00000546229 SGF29Q96ES7 293 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 FUCA2Q9BTY2 467 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 TEX101Q9BY14 249 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 STRADBQ9C0K7 418 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 SPATS2LQ9NUQ6 558 aaKnown RBP12.59□□□□□ -0.39
COPS7A-221ENST00000546229 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 DOLKQ9UPQ8 538 aa12.59□□□□□ -0.39
COPS7A-221ENST00000546229 ZFC3H1O60293 1989 aaKnown RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 TMEM191CA6NGB0 347 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 B4DGG1 531 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 EIF3CLB5ME19 914 aaKnown RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 TMX2-CTNND1H3BSU7 103 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 B4GAT1O43505 415 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 LRCH4O75427 683 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 TNFP01375 233 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 ITGB2P05107 769 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 CEACAM5P06731 702 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 ELFN1P0C7U0 828 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 MYCLP1P12525 358 aaPredicted RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 CSF2RBP32927 897 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 MAZP56270 477 aaKnown RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 AP1S1P61966 158 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 IL10RBQ08334 325 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 SLC10A7Q0GE19 358 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 RFTN1Q14699 578 aaPredicted RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 PTPRRQ15256 657 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 FKBP15Q5T1M5 1219 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 PNCKQ6P2M8 343 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 VASH2Q86V25 355 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 ZFAND4Q86XD8 727 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 FAM46DQ8NEK8 389 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 ATL2Q8NHH9 583 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 EXTL1Q92935 676 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 EIF3CQ99613 913 aaKnown RBP12.58□□□□□ -0.4
COPS7A-221ENST00000546229 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 B3GNT4Q9C0J1 378 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 WDR26Q9H7D7 661 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 ETNK2Q9NVF9 386 aa12.58□□□□□ -0.4
COPS7A-221ENST00000546229 TTC24A2A3L6 582 aaPredicted RBP12.57□□□□□ -0.4
COPS7A-221ENST00000546229 ARHGAP42A6NI28 874 aa12.57□□□□□ -0.4
COPS7A-221ENST00000546229 CACNB4O00305 520 aaPredicted RBP12.57□□□□□ -0.4
COPS7A-221ENST00000546229 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
COPS7A-221ENST00000546229 SLC28A2O43868 658 aa12.57□□□□□ -0.4
COPS7A-221ENST00000546229 PALMO75781 387 aa12.57□□□□□ -0.4
COPS7A-221ENST00000546229 HEXIM1O94992 359 aaKnown RBP12.57□□□□□ -0.4
COPS7A-221ENST00000546229 WISP1O95388 367 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms