RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MYO1FO00160 1098 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 ALPIP09923 528 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 ATP13A4Q4VNC1 1196 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 RD3Q7Z3Z2 195 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 ATL2Q8NHH9 583 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 PDCD6IPQ8WUM4 868 aaKnown RBP21.18■□□□□ 0.98
SCARB1-210ENST00000545493 GLMNQ92990 594 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 COQ10AQ96MF6 247 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 RBM15Q96T37 977 aaKnown RBP eCLIP21.18■□□□□ 0.98
SCARB1-210ENST00000545493 CCDC3Q9BQI4 270 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 MRPL40Q9NQ50 206 aaKnown RBP21.18■□□□□ 0.98
SCARB1-210ENST00000545493 SIRPGQ9P1W8 387 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 DGKBQ9Y6T7 804 aa21.18■□□□□ 0.98
SCARB1-210ENST00000545493 HEXIM1O94992 359 aaKnown RBP21.17■□□□□ 0.98
SCARB1-210ENST00000545493 CTSEP14091 401 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 VIPR1P32241 457 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 ACTN2P35609 894 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 SSR1P43307 286 aaKnown RBP21.17■□□□□ 0.98
SCARB1-210ENST00000545493 RPIAP49247 311 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 TAS2R40P59535 323 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 GALNT2Q10471 571 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 RBM44Q6ZP01 1051 aaKnown RBP21.17■□□□□ 0.98
SCARB1-210ENST00000545493 BBS5Q8N3I7 341 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 TEX26Q8N6G2 289 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 OR56A4Q8NGH8 313 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 FGF11Q92914 225 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 NUS1Q96E22 293 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 BBC3Q96PG8 261 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-210ENST00000545493 ZNF670Q9BS34 389 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 LGR4Q9BXB1 951 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 WDR26Q9H7D7 661 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 RABGEF1Q9UJ41 708 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 PADI4Q9UM07 663 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 DOLKQ9UPQ8 538 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 ENTPD2Q9Y5L3 495 aa21.17■□□□□ 0.98
SCARB1-210ENST00000545493 PTPRQQ9UMZ3 2332 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 A0A1W2PQ67 120 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 NPIPB15A6NHN6 443 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 CACNB4O00305 520 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 TCEA3O75764 348 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 DXOO77932 396 aaKnown RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 PROSCO94903 275 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 PGLSO95336 258 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 MAP3K6O95382 1288 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 TRIM23P36406 574 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 ACOX1Q15067 660 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 PAFAH1B3Q15102 231 aaKnown RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 PTPRRQ15256 657 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 SLC18A3Q16572 532 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 HADHQ16836 314 aaKnown RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 ASTE1Q2TB18 679 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 SOWAHCQ53LP3 525 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 RALGPS1Q5JS13 557 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 MARC1Q5VT66 337 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 GKN2Q86XP6 184 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 TPCN2Q8NHX9 752 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 NSMCE1Q8WV22 266 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 CCDC74AQ96AQ1 378 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 DTD2Q96FN9 168 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 ATXN7L3BQ96GX2 97 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 MCCC1Q96RQ3 725 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-210ENST00000545493 DNAJC7Q99615 494 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 NT5MQ9NPB1 228 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 ASCL3Q9NQ33 180 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 CTTNBP2NLQ9P2B4 639 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 UVRAGQ9P2Y5 699 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 SATB2Q9UPW6 733 aa21.16■□□□□ 0.98
SCARB1-210ENST00000545493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.16■□□□□ 0.981e-6■■■□□ 17.3
SCARB1-210ENST00000545493 PMS2P1A4D2B8 440 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 TNFP01375 233 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 HOXC4P09017 264 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-210ENST00000545493 PTMSP20962 102 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 ETV3P41162 512 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 GARSP41250 739 aaKnown RBP21.15■□□□□ 0.98
SCARB1-210ENST00000545493 LSSP48449 732 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 C3orf38Q5JPI3 329 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 PNCKQ6P2M8 343 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 LVRNQ6Q4G3 990 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 LRRC69Q6ZNQ3 347 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 HSD11B1LQ7Z5J1 315 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 TSPAN33Q86UF1 283 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 MAML1Q92585 1016 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 FAF2Q96CS3 445 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 HIC2Q96JB3 615 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 POLR1BQ9H9Y6 1135 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 GULP1Q9UBP9 304 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 PHTF1Q9UMS5 762 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 GPR34Q9UPC5 381 aa21.15■□□□□ 0.98
SCARB1-210ENST00000545493 NTN3O00634 580 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-210ENST00000545493 RRP8O43159 456 aaKnown RBP21.14■□□□□ 0.97
SCARB1-210ENST00000545493 FZD6O60353 706 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 CCDC173Q0VFZ6 552 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 IHHQ14623 411 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 ANKRD20A8PQ5CZ79 823 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 DENND2CQ68D51 928 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 ALG1LQ6GMV1 187 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 SFTPA2Q8IWL1 248 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 CBARPQ8N350 705 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-210ENST00000545493 SDR16C5Q8N3Y7 309 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 PIH1D2Q8WWB5 315 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms