RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 C3orf18Q9UK00 162 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 CORO2BQ9UQ03 480 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 GAB2Q9UQC2 676 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 COL14A1Q05707 1796 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 CBY3A6NI87 242 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 AKR7A2O43488 359 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 MAFO75444 373 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 HIBADHP31937 336 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 HNRNPH3P31942 346 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 HCAR3P49019 387 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 TOB1P50616 345 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 GBX2P52951 348 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 HIRAP54198 1017 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 DMP1Q13316 513 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 TRADDQ15628 312 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 LRRC36Q1X8D7 754 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 BTBD16Q32M84 506 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PGS1Q32NB8 556 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 DENND1BQ6P3S1 775 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 POTEAQ6S8J7 498 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SLC36A4Q6YBV0 504 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PRR23BQ6ZRT6 265 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 KIAA0408Q6ZU52 694 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 USP50Q70EL3 339 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ERMP1Q7Z2K6 904 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 MICU3Q86XE3 530 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 NKAPQ8N5F7 415 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 NR4A3Q92570 626 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 TMA16Q96EY4 203 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SLC25A23Q9BV35 468 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SORBS1Q9BX66 1292 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 BOLA2Q9H3K6 86 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 UNKLQ9H9P5 680 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 KCNK13Q9HB14 408 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PNO1Q9NRX1 252 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ATAD5Q96QE3 1844 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 J3QRK9 145 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 K7ERQ8 282 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PRAMEF2O60811 474 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 TADA2AO75478 443 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 MED6O75586 246 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PNPP00491 289 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SLC2A3P11169 496 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 WARSP23381 471 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 MMP13P45452 471 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 GALEQ14376 348 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 HDDC2Q7Z4H3 204 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 NLRP8Q86W28 1048 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 GATAD2BQ8WXI9 593 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 FBXL8Q96CD0 374 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SERPINB12Q96P63 405 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 TMEM246Q9BRR3 403 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 OR51B5Q9H339 312 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SOHLH2Q9NX45 425 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 KCND2Q9NZV8 630 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SRPRBQ9Y5M8 271 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PDS5AQ29RF7 1337 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 GRID2IPA4D2P6 1211 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 TO15178 435 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 APOL3O95236 402 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 GJB6O95452 261 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 CSF1RP07333 972 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ERVK-10P10266 1014 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 GCH1P30793 250 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 HTR7P34969 479 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 NAMPTP43490 491 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 STAT5BP51692 787 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 BCAR1P56945 870 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 YWHAGP61981 247 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 STAT4Q14765 748 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PDK2Q15119 407 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF783Q6ZMS7 281 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 RP9Q8TA86 221 aaKnown RBP8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SEC14L1Q92503 715 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 SGCZQ96LD1 299 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 CDRT15Q96T59 188 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 ZBTB18Q99592 522 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 FAM213AQ9BRX8 229 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 CD209Q9NNX6 404 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 PDE7BQ9NP56 450 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 CABP5Q9NP86 173 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 POMT1Q9Y6A1 747 aa8.92□□□□□ -0.98
VPS13D-212ENST00000543766 A0A087X0B3 334 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 FAM172BPA6NC97 362 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 STX16O14662 325 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RNMTO43148 476 aaKnown RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 SPDEFO95238 335 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NADKO95544 446 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MAOBP27338 520 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RRM2P31350 389 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PIK3CGP48736 1102 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 P2RY4P51582 365 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 HNRNPKP61978 463 aaKnown RBP eCLIP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PURAQ00577 322 aaKnown RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 FLI1Q01543 452 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RAD51Q06609 339 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms