RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 DPPA4Q7L190 304 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 ARL14Q8N4G2 192 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 NPWQ8N729 165 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 ARL10Q8N8L6 244 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 CCNYQ8ND76 341 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 FAM46DQ8NEK8 389 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 WDR36Q8NI36 951 aaKnown RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 ECHDC3Q96DC8 303 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 NUS1Q96E22 293 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 SCRN2Q96FV2 425 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 CCDC42Q96M95 316 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 ZNF830Q96NB3 372 aaPredicted RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 GFM1Q96RP9 751 aaKnown RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 LGMNQ99538 433 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 CCDC3Q9BQI4 270 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 LRRC61Q9BV99 259 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 XPO4Q9C0E2 1151 aaKnown RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 STRADBQ9C0K7 418 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 POLR1EQ9GZS1 481 aaKnown RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 CLPBQ9H078 707 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 TCEAL2Q9H3H9 227 aaPredicted RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 DPEP2Q9H4A9 486 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 CYP4F12Q9HCS2 524 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 NT5MQ9NPB1 228 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 THSD1Q9NS62 852 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 ETNK2Q9NVF9 386 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.18□□□□□ -1.26
NUP43-206ENST00000543637 AMACRQ9UHK6 382 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 DNPEPQ9ULA0 475 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 DNAH14Q0VDD8 3507 aa7.18□□□□□ -1.26
NUP43-206ENST00000543637 GOLGA4Q13439 2230 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 ARID1BQ8NFD5 2236 aaPredicted RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 CCDC187A0A096LP49 1063 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TTC24A2A3L6 582 aaPredicted RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 PSMD11O00231 422 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 MATN3O15232 486 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TLX3O43711 291 aaPredicted RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 PROSCO94903 275 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 GYPCP04921 128 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 PYGLP06737 847 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 CCNB1P14635 433 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TCF4P15884 667 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 ZNF30P17039 623 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 MX2P20592 715 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 HNRNPH3P31942 346 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 TRIM23P36406 574 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 ARHGAP25P42331 645 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 GPR1P46091 355 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 PPM1FP49593 454 aaPredicted RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 UCNP55089 124 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 PCBP4P57723 403 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 KIAA1024LP59773 190 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 MAXP61244 160 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 PAFAH1B3Q15102 231 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 SLC18A3Q16572 532 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 ALG11Q2TAA5 492 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TBC1D25Q3MII6 688 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 C3orf38Q5JPI3 329 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 PERM1Q5SV97 790 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 SPECC1LQ69YQ0 1117 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 RAET1GQ6H3X3 334 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 CCDC70Q6NSX1 233 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 CRTC1Q6UUV9 634 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 BZW1Q7L1Q6 419 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 ZSWIM9Q86XI8 627 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TP53INP2Q8IXH6 220 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 SLC35F3Q8IY50 421 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.17□□□□□ -1.26
NUP43-206ENST00000543637 PLA2G15Q8NCC3 412 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 KIAA1524Q8TCG1 905 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 CCHCR1Q8TD31 782 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 FUBP1Q96AE4 644 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 VOPP1Q96AW1 172 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 NAF1Q96HR8 494 aaKnown RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 TMEM74Q96NL1 305 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 RBM15Q96T37 977 aaKnown RBP eCLIP7.17□□□□□ -1.266e-7■■■■■ 27.1
NUP43-206ENST00000543637 SEMA3CQ99985 751 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 GSDMCQ9BYG8 508 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 DPH1Q9BZG8 443 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TSPY26PQ9H489 355 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 WDR26Q9H7D7 661 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 NOD2Q9HC29 1040 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 RBM22Q9NW64 420 aaKnown RBP eCLIP7.17□□□□□ -1.26
NUP43-206ENST00000543637 WDR70Q9NW82 654 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 AKAP7Q9P0M2 348 aaPredicted RBP7.17□□□□□ -1.26
NUP43-206ENST00000543637 B4GALT6Q9UBX8 382 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 SATB2Q9UPW6 733 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 TTLL3Q9Y4R7 772 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 PCDHB1Q9Y5F3 818 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 RAI2Q9Y5P3 530 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 DGKBQ9Y6T7 804 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 KNL1Q8NG31 2342 aa7.17□□□□□ -1.26
NUP43-206ENST00000543637 SPTBN2O15020 2390 aa7.16□□□□□ -1.26
NUP43-206ENST00000543637 LY6G6EA0A0G2JKS1 128 aa7.16□□□□□ -1.26
NUP43-206ENST00000543637 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
NUP43-206ENST00000543637 PRSS38A1L453 326 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms