RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 BCL2L1Q07817 233 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 CTBP1Q13363 440 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 WLSQ5T9L3 541 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 GET4Q7L5D6 327 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 CLEC14AQ86T13 490 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 CILP2Q8IUL8 1156 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 TDHQ8IZJ6 230 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 MDGA1Q8NFP4 955 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 WFIKKN2Q8TEU8 576 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 ATXN7L3BQ96GX2 97 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 C19orf43Q9BQ61 176 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 C12orf65Q9H3J6 166 aaKnown RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 IGFLR1Q9H665 355 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 EVLQ9UI08 416 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 FAM95CA0A1B0GW59 222 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 RFXAPO00287 272 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 BIRC5O15392 142 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 NFATC1O95644 943 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 F7P08709 466 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 LPOP22079 712 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 FCARP24071 287 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 SERPINA4P29622 427 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 VIPR2P41587 438 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 TCEAL5Q5H9L2 206 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 MBLAC2Q68D91 279 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 SYCE2Q6PIF2 218 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 AFTPHQ6ULP2 937 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 PIGWQ7Z7B1 504 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 CMC1Q7Z7K0 106 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 PLPP6Q8IY26 295 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 TTC30BQ8N4P2 665 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 OR13C4Q8NGS5 318 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 OR6P1Q8NGX9 317 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 RAB3IL1Q8TBN0 382 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 PDCD6IPQ8WUM4 868 aaKnown RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 PIH1D2Q8WWB5 315 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 TBATAQ96M53 351 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 EMCNQ9ULC0 261 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 CORO1CQ9ULV4 474 aaPredicted RBP9.35□□□□□ -0.91
GNE-206ENST00000543356 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 TRANK1O15050 2925 aa9.35□□□□□ -0.91
GNE-206ENST00000543356 A0A096LPK6 155 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CCDC162PA2VCL2 907 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 MUC22E2RYF6 1773 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 KLF11O14901 512 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 AURKAO14965 403 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CHUKO15111 745 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 GOT2P00505 430 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CISD3P0C7P0 127 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 HOXB8P17481 243 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 POLR2EP19388 210 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 ABCG1P45844 678 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CLNS1AP54105 237 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 POU4F1Q01851 419 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 PDGFRLQ15198 375 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 MYLK3Q32MK0 819 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CARD16Q5EG05 197 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 COL13A1Q5TAT6 717 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 MRNIPQ6NTE8 343 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 DENND4AQ7Z401 1863 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 PTAR1Q7Z6K3 402 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 SPATS2Q86XZ4 545 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CAMK1DQ8IU85 385 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 DRAXINQ8NBI3 349 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 ACVR1CQ8NER5 493 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ZNF75CPQ92670 426 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 VOPP1Q96AW1 172 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 GRAMD1AQ96CP6 724 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ASIC4Q96FT7 647 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CDKN2AIPNLQ96HQ2 116 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 RPL10LQ96L21 214 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CPEB1Q9BZB8 566 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CAB39LQ9H9S4 337 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 FBXO6Q9NRD1 293 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CATSPERZQ9NTU4 200 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 FGFR1OP2Q9NVK5 253 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 POLR3BQ9NW08 1133 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ERVW-1Q9UQF0 538 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 SLC27A6Q9Y2P4 619 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ZNF711Q9Y462 761 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 SCN8AQ9UQD0 1980 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 HEPACAM2A8MVW5 462 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 WASH3PC4AMC7 463 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 H7C0S8 307 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CCL22O00626 93 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CD3EAPO15446 510 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 LINC01565O15544 149 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 PLIN3O60664 434 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 HAUS5O94927 633 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 PIGNO95427 931 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 IL1BP01584 269 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ASLP04424 464 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 C2P06681 752 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms