RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 EPM2AIP1Q7L775 607 aaPredicted RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TAC4Q86UU9 113 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 IRF2BP1Q8IU81 584 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 DENND6BQ8NEG7 585 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 RNF217Q8TC41 542 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CXorf40AQ8TE69 158 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 NANOS1Q8WY41 292 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KCTD13Q8WZ19 329 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ALG14Q96F25 216 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 PDXPQ96GD0 296 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 SLC39A13Q96H72 371 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 AHCYL2Q96HN2 611 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ELMO2Q96JJ3 720 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 RANBP9Q96S59 729 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 C1QTNF7Q9BXJ2 289 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TM6SF2Q9BZW4 377 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 LRRC27Q9C0I9 530 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TMEM168Q9H0V1 697 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 BLZF1Q9H2G9 400 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 TRIT1Q9H3H1 467 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 SUV39H2Q9H5I1 410 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CNGB3Q9NQW8 809 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ACSS2Q9NR19 701 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ST7Q9NRC1 585 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 SPATS2LQ9NUQ6 558 aaKnown RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 ASF1BQ9NVP2 202 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KBTBD4Q9NVX7 518 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 HECAQ9UBI9 543 aaPredicted RBP4.81□□□□□ -1.64
LIMS1-214ENST00000542845 KLHL3Q9UH77 587 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 CROTQ9UKG9 612 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 FRMD4BQ9Y2L6 1034 aa4.81□□□□□ -1.64
LIMS1-214ENST00000542845 A0A0D9SEW6 157 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 TMEM202A6NGA9 273 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 TMEM110-MUSTN1A8MSY1 372 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 IKBKBO14920 756 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 POLR1CO15160 346 aaPredicted RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 PPP6R2O75170 966 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 FBXO24O75426 580 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 SORBS2O94875 1100 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ECEL1O95672 775 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 TRUB2O95900 331 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 UGT2B4P06133 528 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 FYNP06241 537 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 EDN3P14138 238 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 XPAP23025 273 aaPredicted RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 HNRNPH3P31942 346 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 CASP14P31944 242 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 MAN1A1P33908 653 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 STAT5AP42229 794 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 MAPK9P45984 424 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ST13P50502 369 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 CCNHP51946 323 aaPredicted RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 PMS2P54278 862 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 PER3P56645 1201 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 AMPD3Q01432 767 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 MC2RQ01718 297 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 FOXM1Q08050 763 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 PPP3CAQ08209 521 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 LRMPQ12912 555 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 SEMA5AQ13591 1074 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 TRA2AQ13595 282 aaKnown RBP eCLIP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 NFATC4Q14934 902 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 CARD16Q5EG05 197 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 C1orf220Q5T0J3 134 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 CPZQ66K79 652 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 FOXR2Q6PJQ5 311 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 OGFOD3Q6PK18 319 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 C6orf15Q6UXA7 325 aaPredicted RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 GDF7Q7Z4P5 450 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 NOP9Q86U38 636 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 SLC47A2Q86VL8 602 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ZNF761Q86XN6 746 aaPredicted RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 RELL1Q8IUW5 271 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 GALNT12Q8IXK2 581 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ESX1Q8N693 406 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 TP53I13Q8NBR0 393 aaPredicted RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 GALNT6Q8NCL4 622 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 OR7D4Q8NG98 312 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 OR4D9Q8NGE8 314 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ATL2Q8NHH9 583 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 KIAA1524Q8TCG1 905 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 PATE1Q8WXA2 126 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ASB12Q8WXK4 309 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 OR1E3Q8WZA6 343 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 IRGQQ8WZA9 623 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 DHX58Q96C10 678 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 SNRNP40Q96DI7 357 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 EEF2KMTQ96G04 330 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 WDR92Q96MX6 357 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 KLHL32Q96NJ5 620 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 TEFMQ96QE5 360 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 RBM15Q96T37 977 aaKnown RBP eCLIP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 PSMB7Q99436 277 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 ULBP3Q9BZM4 244 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 SPRY4Q9C004 299 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 FAM204AQ9H8W3 233 aa4.8□□□□□ -1.64
LIMS1-214ENST00000542845 CGNQ9P2M7 1197 aaKnown RBP4.8□□□□□ -1.64
LIMS1-214ENST00000542845 DMGDHQ9UI17 866 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms