RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CHN1P15882 459 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 HDCP19113 662 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CDH3P22223 829 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PRKACBP22694 351 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PCSK6P29122 969 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 HOXA7P31268 230 aaPredicted RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 SLC16A2P36021 539 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ALDH9A1P49189 494 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CLK1P49759 484 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF81P51508 661 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 BLVRAP53004 296 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MAGOHP61326 146 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CDR2Q01850 454 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 TFF2Q03403 129 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 GOLGA8FQ08AF8 430 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 GOLGA8DPQ0D2H9 430 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 GRM1Q13255 1194 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 GIT2Q14161 759 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PPP2R5BQ15173 497 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 SRSF7Q16629 238 aaKnown RBP eCLIP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 RILPL1Q5EBL4 403 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF782Q6ZMW2 699 aaPredicted RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ANO5Q75V66 913 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MIER3Q7Z3K6 550 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 LRRC34Q8IZ02 419 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 DCLK2Q8N568 766 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 LINC00469Q8N7U9 141 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF713Q8N859 430 aaPredicted RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 LSMEM1Q8N8F7 131 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 FAM133AQ8N9E0 248 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 NGDNQ8NEJ9 315 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 BRIX1Q8TDN6 353 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 NELFBQ8WX92 580 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PEX13Q92968 403 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 HPS3Q969F9 1004 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MAGOHBQ96A72 148 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MVB12AQ96EY5 273 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 SLC35A4Q96G79 324 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CAPZA3Q96KX2 299 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CCDC138Q96M89 665 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PRICKLE1Q96MT3 831 aaPredicted RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 BTBD9Q96Q07 612 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PPP1R10Q96QC0 940 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 NELL2Q99435 816 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ELAC2Q9BQ52 826 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 SPZ1Q9BXG8 430 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 FOXP1Q9H334 677 aaPredicted RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 DCAF16Q9NXF7 216 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 KLHL42Q9P2K6 505 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MTRF1LQ9UGC7 380 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 SERGEFQ9UGK8 458 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CNOT7Q9UIV1 285 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 GNPTGQ9UJJ9 305 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MAN1B1Q9UKM7 699 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 NFU1Q9UMS0 254 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PCDHA6Q9UN73 950 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ERVK-11Q9UQG0 969 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 LZTS1Q9Y250 596 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 MRPL11Q9Y3B7 192 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 PCDHGB3Q9Y5G1 929 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 RGPD5Q99666 1765 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CLRN2A0PK11 232 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 LINC01548A6NM66 108 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 H3BNX3 289 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 CPLX1O14810 134 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 MCF2LO15068 1137 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 DCLK1O15075 740 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 GUCY1B2O75343 617 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 TRMUO75648 421 aaKnown RBP5.96□□□□□ -1.46
XRCC4-206ENST00000542685 KLHL2O95198 593 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 KRT75O95678 551 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 S100A6P06703 90 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 MYBL1P10243 752 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 PTPN4P29074 926 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 KCNJ5P48544 419 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 IFNAR2P48551 515 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 DSTNP60981 165 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 OLR1P78380 273 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 CREB5Q02930 508 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 RIPPLY1Q0D2K3 151 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 PTK2BQ14289 1009 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 USP41Q3LFD5 358 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 KRT71Q3SY84 523 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 C1orf141Q5JVX7 400 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 EPHA10Q5JZY3 1008 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 TTC39AQ5SRH9 613 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 TMEM63BQ5T3F8 832 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 TMTC4Q5T4D3 741 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF618Q5T7W0 954 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 TEDDM1Q5T9Z0 273 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 C6orf163Q5TEZ5 329 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 SLX4IPQ5VYV7 408 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 KIAA1614Q5VZ46 1190 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 SPOPLQ6IQ16 392 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF530Q6P9A1 599 aaPredicted RBP5.96□□□□□ -1.46
XRCC4-206ENST00000542685 AAGABQ6PD74 315 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 C4orf50Q6ZRC1 276 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 KRT27Q7Z3Y8 459 aa5.96□□□□□ -1.46
XRCC4-206ENST00000542685 MAVSQ7Z434 540 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms