RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 PSMD11O00231 422 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 NTN3O00634 580 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 CPP00450 1065 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 TNFP01375 233 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 GYPCP04921 128 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 MPOP05164 745 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 CELA2BP08218 269 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 FAM228BP0C875 321 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 ITPKBP27987 946 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 TRIM23P36406 574 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 HADHQ16836 314 aaKnown RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 TSR1Q2NL82 804 aaKnown RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 ALKBH5Q6P6C2 394 aaKnown RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 PLA2G15Q8NCC3 412 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 TSACCQ96A04 125 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 FUBP1Q96AE4 644 aaKnown RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 COQ10AQ96MF6 247 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 NSMCE3Q96MG7 304 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 UBL7Q96S82 380 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-206ENST00000542310 CCDC3Q9BQI4 270 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 WDR26Q9H7D7 661 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 ASCL3Q9NQ33 180 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 NENFQ9UMX5 172 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 ENTPD2Q9Y5L3 495 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 ARHGEF17Q96PE2 2063 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-206ENST00000542310 PDE2AO00408 941 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-206ENST00000542310 TPM3P06753 285 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 CYP2A6P11509 494 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-206ENST00000542310 TEAD1P28347 426 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 HNRNPH3P31942 346 aaKnown RBP15.67■□□□□ 0.1
VPS33A-206ENST00000542310 VIPR1P32241 457 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 MMP13P45452 471 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 PDX1P52945 283 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 TLE3Q04726 772 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 SPIDRQ14159 915 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 KRT81Q14533 505 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 CNGA3Q16281 694 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 MARC1Q5VT66 337 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 TXNRD3NBQ6F5E7 133 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 PGBD5Q8N414 524 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 ZNF564Q8TBZ8 553 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-206ENST00000542310 FATE1Q969F0 183 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 NUS1Q96E22 293 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 CRELD1Q96HD1 420 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 MCCC1Q96RQ3 725 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-206ENST00000542310 LGMNQ99538 433 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 ZNF670Q9BS34 389 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 FGF22Q9HCT0 170 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 HAUS2Q9NVX0 235 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 UVRAGQ9P2Y5 699 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 PHTF1Q9UMS5 762 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 GPR34Q9UPC5 381 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 SATB2Q9UPW6 733 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 SCN8AQ9UQD0 1980 aa15.67■□□□□ 0.1
VPS33A-206ENST00000542310 HEXIM1O94992 359 aaKnown RBP15.66■□□□□ 0.1
VPS33A-206ENST00000542310 MYCLP1P12525 358 aaPredicted RBP15.66■□□□□ 0.1
VPS33A-206ENST00000542310 ARSEP51690 589 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 UCNP55089 124 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 TRAF2Q12933 501 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 ACOX1Q15067 660 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 C3orf38Q5JPI3 329 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 CCDC122Q5T0U0 273 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 ALG1LQ6GMV1 187 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 TIGD7Q6NT04 549 aaPredicted RBP15.66■□□□□ 0.1
VPS33A-206ENST00000542310 PNCKQ6P2M8 343 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 USP45Q70EL2 814 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 SPACA3Q8IXA5 215 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 TEX26Q8N6G2 289 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 GPR156Q8NFN8 814 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 OR1E3Q8WZA6 343 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 CCDC74AQ96AQ1 378 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 DTD2Q96FN9 168 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 ATXN7L3BQ96GX2 97 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 LIN37Q96GY3 246 aaPredicted RBP15.66■□□□□ 0.1
VPS33A-206ENST00000542310 BTBD6Q96KE9 485 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 NOD2Q9HC29 1040 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 AMACRQ9UHK6 382 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 PPIL1Q9Y3C6 166 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 PCDHGC4Q9Y5F7 938 aa15.66■□□□□ 0.1
VPS33A-206ENST00000542310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.66■□□□□ 0.1
VPS33A-206ENST00000542310 ZFC3H1O60293 1989 aaKnown RBP15.66■□□□□ 0.1
VPS33A-206ENST00000542310 CCDC187A0A096LP49 1063 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 PRSS38A1L453 326 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 TMEM202A6NGA9 273 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 D6RAR5 112 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 TMX2-CTNND1H3BSU7 103 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 MFSD11O43934 449 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 PGLSO95336 258 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 KRT10P13645 584 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 PNLIPP16233 465 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 IL4RP24394 825 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 GARSP41250 739 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 SKOR1P84550 965 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 CCDC173Q0VFZ6 552 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 GALNT2Q10471 571 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 EIF3IQ13347 325 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 TRIM14Q14142 442 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 DPYSL3Q14195 570 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 PAFAH1B3Q15102 231 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 NFKBIBQ15653 356 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms