RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CD3EAPO15446 510 aaKnown RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 PIGNO95427 931 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 GSTA1P08263 222 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 CTPS1P17812 591 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 CSHL1Q14406 222 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 SETDB1Q15047 1291 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 C9orf50Q5SZB4 431 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 VWA5B1Q5TIE3 1220 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 HECTD2Q5U5R9 776 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 GLT6D1Q7Z4J2 308 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 ING5Q8WYH8 240 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 EID2BQ96D98 161 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 GATA5Q9BWX5 397 aaPredicted RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 SHCBP1LQ9BZQ2 653 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 IGSF5Q9NSI5 407 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 ZFP69BQ9UJL9 534 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 MTCL1Q9Y4B5 1905 aaKnown RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 TYW5A2RUC4 315 aaKnown RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 TARM1B6A8C7 271 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 ZNF821O75541 412 aaPredicted RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 RPP40O75818 363 aaKnown RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 CHRNGP07510 517 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 ALPIP09923 528 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 SEMG2Q02383 582 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 CCDC15Q0P6D6 951 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 USP4Q13107 963 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 KIAA0408Q6ZU52 694 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 NMUR2Q9GZQ4 415 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 SLC40A1Q9NP59 571 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 EVLQ9UI08 416 aaPredicted RBP17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 DCTN3O75935 186 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 GLP2RO95838 553 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 HLA-FP30511 346 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 HADHAP40939 763 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 DGKKQ5KSL6 1271 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 LRRC8EQ6NSJ5 796 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 PACS2Q86VP3 889 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 DCAF4L2Q8NA75 395 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 OR4L1Q8NH43 312 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 RAB3IL1Q8TBN0 382 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 CALML6Q8TD86 181 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 ABCB8Q9NUT2 735 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 OXSMQ9NWU1 459 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 DLX3O60479 287 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 DNAJC8O75937 253 aaPredicted RBP17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 KCNA5P22460 613 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 POU4F1Q01851 419 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 INO80DQ53TQ3 878 aaPredicted RBP17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 ZNF783Q6ZMS7 281 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 RPS27LQ71UM5 84 aaKnown RBP17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 GRASPQ7Z6J2 395 aaPredicted RBP17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 PIANPQ8IYJ0 282 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 ZNF781Q8N8C0 355 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 ZNF398Q8TD17 642 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 ARL8BQ9NVJ2 186 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 POLR3BQ9NW08 1133 aaPredicted RBP17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 VWA7Q9Y334 891 aa17.29■□□□□ 0.36
TMEM50B-210ENST00000542230 A8MX80 341 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 BNIP3LO60238 219 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 UNC5CO95185 931 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 KLHL2O95198 593 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CA3P07451 260 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CCDC166P0CW27 439 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 KCNC1P48547 511 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 SLC12A2P55011 1212 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 PLEKHG6Q3KR16 790 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 C12orf76Q8N812 135 aaPredicted RBP17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 GBP7Q8N8V2 638 aaPredicted RBP17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 STYXQ8WUJ0 223 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 VOPP1Q96AW1 172 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 RASSF4Q9H2L5 321 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 NLE1Q9NVX2 485 aaPredicted RBP17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 FKBPLQ9UIM3 349 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 ARHGAP26Q9UNA1 814 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 LZTS1Q9Y250 596 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 ANKRD6Q9Y2G4 727 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CLASP2O75122 1294 aaKnown RBP17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CRABP2P29373 138 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 NAGLUP54802 743 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 ZBTB16Q05516 673 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 MPPE1Q53F39 396 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 ASRGL1Q7L266 308 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CPXM2Q8N436 756 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 PIWIL2Q8TC59 973 aaKnown RBP17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CCDC97Q96F63 343 aaPredicted RBP17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 GPAMQ9HCL2 828 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 CATSPERZQ9NTU4 200 aa17.28■□□□□ 0.36
TMEM50B-210ENST00000542230 FCHO1O14526 889 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 TRIM13O60858 407 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 GRIA4P48058 902 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 PSAPL1Q6NUJ1 521 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 ZYG11AQ6WRX3 759 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 ADGRD2Q7Z7M1 963 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 FIBINQ8TAL6 211 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 KLHL29Q96CT2 875 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms