RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RPS16P62249 146 aaKnown RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 LRRC63Q05C16 580 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 CETN1Q12798 172 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 HTR4Q13639 388 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 ZNF699Q32M78 642 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 GRAMD1BQ3KR37 738 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 ARL13BQ3SXY8 428 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 ZACNQ401N2 412 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 CFAP221Q4G0U5 840 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 CRB2Q5IJ48 1285 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 DGKKQ5KSL6 1271 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 KRT39Q6A163 491 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 FAM171BQ6P995 826 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 PARM1Q6UWI2 310 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 LAYNQ6UX15 382 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 VSTM1Q6UX27 236 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 SCN4BQ8IWT1 228 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 RHOT2Q8IXI1 618 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 TXLNBQ8N3L3 684 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 TTC39CQ8N584 583 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 TRIML1Q8N9V2 468 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 PDPRQ8NCN5 879 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 FAM46DQ8NEK8 389 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 SPATA20Q8TB22 786 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 MYCBPAPQ8TBZ2 947 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 DEPDC1BQ8WUY9 529 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 ING5Q8WYH8 240 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 SMARCD2Q92925 531 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 MARS2Q96GW9 593 aaKnown RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 SNX22Q96L94 193 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 MED15Q96RN5 788 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 RTP3Q9BQQ7 232 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 SYT15Q9BQS2 421 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 TRMT61BQ9BVS5 477 aaKnown RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 TMEM8AQ9HCN3 771 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 SLC2A4RGQ9NR83 387 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 NEU2Q9Y3R4 380 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 TCAF1Q9Y4C2 921 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 A0A0C4DFX4 3053 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 PTPRJQ12913 1337 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 DENND4AQ7Z401 1863 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 MYBPHLA2RUH7 354 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MBD3L4A6NDZ8 208 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MBD3L3A6NE82 208 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PATE3B3GLJ2 98 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PYCARD-AS1I3L0S3 204 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ZNF263O14978 683 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 NCAM2O15394 837 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 SLC16A3O15427 465 aaKnown RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PRICKLE3O43900 615 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 VPS4BO75351 444 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 AKAP3O75969 853 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 INMTO95050 263 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 VNN2O95498 520 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 GNA14O95837 355 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ANXA2P07355 339 aaKnown RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PIM1P11309 404 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 CEBPBP17676 345 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PSMC3P17980 439 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 CYP2F1P24903 491 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 LMO2P25791 158 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 AVPR2P30518 371 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 AVPR1AP37288 418 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PPP3CCP48454 512 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 GCLMP48507 274 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 SLC11A2P49281 568 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PDE6CP51160 858 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 UCP3P55916 312 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 GPC5P78333 572 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 TEAD2Q15562 447 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 PDCD2Q16342 344 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 SLC5A9Q2M3M2 681 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 SPDYE7PQ495Y7 208 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 NAIF1Q69YI7 327 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ANKRD40Q6AI12 368 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ISM2Q6H9L7 571 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 TANGO2Q6ICL3 276 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 UNC93AQ86WB7 457 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MFSD6LQ8IWD5 586 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ADSSL1Q8N142 457 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 CFAP52Q8N1V2 620 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ZNF808Q8N4W9 903 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 Q8TCH9 128 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 CSGALNACT1Q8TDX6 532 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MRPS31Q92665 395 aaKnown RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 FGF14Q92915 247 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 TCEAL4Q96EI5 215 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 LOXL4Q96JB6 756 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 SPATA17Q96L03 361 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 NELL2Q99435 816 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MRPL45Q9BRJ2 306 aaKnown RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MED10Q9BTT4 135 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 ELOVL4Q9GZR5 314 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MS4A7Q9GZW8 240 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 FAM124BQ9H5Z6 455 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-220ENST00000541963 TASP1Q9H6P5 420 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 MMRN2Q9H8L6 949 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 SMURF2Q9HAU4 748 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 CYP3A43Q9HB55 503 aa5.63□□□□□ -1.51
CPSF7-220ENST00000541963 TRPV4Q9HBA0 871 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms